EY664716 | Citrus Genome Database

Overview


Name	EY664716
Unique Name	EY664716
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	908

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METTH (50S ribosomal protein L3P OS=Methanobacterium thermoautotrophicum GN=rpl3p PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.323e-27
Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMK---KYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            +   PR GS+ F PRKRA+R   +VK++P+ D+P     L A  GYKAGMTH++    +  S     E    VTI+E PPL         KT RGL++L  V A    +++RR+                      DD   D +A +EK++   +Y   +RV+ HT  R +  + +KK  + E  + G +  +K ++A     K +    +F +   +D I VTK
Sbjct:    3 RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRKL-----------------TPPADD--YDQEAAIEKIRSNMEYVADVRVIVHTNPR-LASVPKKKPEVFECGLGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTK 203

HSP 2 Score: 38.1206 bits (87), Expect = 5.323e-27
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 2

Query:  788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            L  W  +R  +TV +AGQ GYH RTE NK+   +
Sbjct:  235 LGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKI 268

HSP 3 Score: 22.7126 bits (47), Expect = 5.323e-27
Identity = 14/34 (41.18%), Postives = 16/34 (47.06%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIGCL 798
            KG+   G V RWG+     K  R   KG  IG L
Sbjct:  203 KGKGFQGPVKRWGIRIQYGKAARS-SKGRHIGSL 235

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.905e-27
Identity = 76/227 (33.48%), Postives = 112/227 (49.34%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGK-KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKRA       K +P  +  +P +L  F+GYKAGMTH+    +KP S  + KE    VTI+E+PP+            +G L  L   WA    EE   ++ K                 + D  K K+    ++K     T +R+L  TQ   +  L +K+  ++EIQ+ GGS+  ++++      KQIP+  VF++ ++ DIIGVTK
Sbjct:    1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYLKR-----------KITSLKVDSSKMKEKLDLIQKNLNNITYMRLLVSTQPWLVPSLGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTK 213

HSP 2 Score: 26.1794 bits (56), Expect = 6.905e-27
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2

Query:  824 VARAGQNGYHHRTEMNKKFTSL 889
            V + GQ G+H RTE NK+   +
Sbjct:  255 VPQPGQLGFHRRTEYNKRIIKI 276

HSP 3 Score: 24.6386 bits (52), Expect = 6.905e-27
Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V   PR  K  +G RK
Sbjct:  213 KGKGFQGVIKRYSVVEFPRWHKHRKGSRK 241

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRKO (50S ribosomal protein L3P OS=Pyrococcus kodakaraensis GN=rpl3p PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.960e-27
Identity = 74/229 (32.31%), Postives = 107/229 (46.72%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFY---KNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKY-----CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL + PRKRA     +++++PKD      R+  F GYKAGMTHI+   + PG     KE    VTI+E PPL         +   GL +   VW   L++ V RR     KN+                    ++  QA+L +++          +R+L HTQ   + GLK KK  +ME  + G  V  K D+A     K++    V  + E++D+I VTK
Sbjct:    3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKD---SEVRMLGFAGYKAGMTHILMIDDSPG-LTKGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRIKTLPKNY-------------------NEEAFQAKLGQLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTK 206

HSP 2 Score: 43.5134 bits (101), Expect = 8.960e-27
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            L  W  ARV +TV +AGQ G+HHRTE NK+  ++
Sbjct:  238 LGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAI 271

HSP 3 Score: 23.0978 bits (48), Expect = 8.960e-27
Identity = 16/41 (39.02%), Postives = 19/41 (46.34%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIGCL 798
            L ++   KG+   G V RWGV     K  R   KG  IG L
Sbjct:  199 LDVIAVTKGKGTQGPVKRWGVKVQFHKAQRA-GKGRHIGNL 238

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRIL (50S ribosomal protein L3P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.300e-26
Identity = 72/227 (31.72%), Postives = 109/227 (48.02%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P S L+ KE  +AVT+++ PPL           P     RS+  VWA  L   +RR                      T   K D+  Q++K++++  V   +R L  TQ   + G+ +K   L+EI + G  SV +++ FA     K +    VF   +++D+I VTK
Sbjct:    8 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRRVL--------------------TLPEKVDVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTK 212

HSP 2 Score: 31.187 bits (69), Expect = 3.300e-26
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 2

Query:  812 VSFTVARAGQNGYHHRTEMNKKFTSL 889
            V FT  R GQ G+H RTE NK+   +
Sbjct:  251 VMFTQPRPGQMGFHQRTEYNKRIIKI 276

HSP 3 Score: 29.6462 bits (65), Expect = 3.300e-26
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRKGACIG 792
            KG+   GV+ R+GVT LPR  K  +G R+   IG
Sbjct:  212 KGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIG 245

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRAE (50S ribosomal protein L3P OS=Pyrobaculum aerophilum GN=rpl3p PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.362e-26
Identity = 71/227 (31.28%), Postives = 110/227 (48.46%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P S L+ KE  +AVT+++ PPL           P     R++  VWA  L + + R                      T   K D+  QL+K++++  V   +R L  TQ   + G+ +K   L+EI + G  SV ++++FA     K +    VF   +++D+I VTK
Sbjct:    4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHRVL--------------------TLPEKLDVDKQLKKVEEFRDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTK 208

HSP 2 Score: 31.187 bits (69), Expect = 9.362e-26
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 2

Query:  812 VSFTVARAGQNGYHHRTEMNKKFTSL 889
            V FT  R GQ G+H RTE NK+   +
Sbjct:  247 VMFTQPRPGQMGFHQRTEYNKRLLKI 272

HSP 3 Score: 29.6462 bits (65), Expect = 9.362e-26
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRKGACIG 792
            KG+   GV+ R+GVT LPR  K  +G R+   IG
Sbjct:  208 KGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIG 241

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_THENV (50S ribosomal protein L3P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.215e-25
Identity = 71/227 (31.28%), Postives = 107/227 (47.14%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GS+G  PRKRA+    +V+ +P+ +  KP  L  F  YKAGM H V   ++P S L+ KE    VT+++ PPL           P     RS+  VWA  L   +RR                      T   K D+  Q++K++++  V   +R L  TQ   + G+ +K   L+EI + G  SV +++ FA     K +    VF   +++D+I VTK
Sbjct:    4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPTSPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL--------------------TLPEKADVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTK 208

HSP 2 Score: 30.0314 bits (66), Expect = 1.215e-25
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2

Query:  818 FTVARAGQNGYHHRTEMNKKFTSL 889
            FT  R GQ G+H RTE NK+   +
Sbjct:  249 FTQPRPGQMGFHQRTEYNKRVVKI 272

HSP 3 Score: 29.6462 bits (65), Expect = 1.215e-25
Identity = 16/34 (47.06%), Postives = 21/34 (61.76%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRKGACIG 792
            KG+   GV+ R+GVT LPR  K  +G R+   IG
Sbjct:  208 KGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIG 241

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULSO (50S ribosomal protein L3P OS=Sulfolobus solfataricus GN=rpl3p PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.651e-25
Identity = 72/235 (30.64%), Postives = 113/235 (48.09%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GMTH+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK        +L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHS------------ISSFLKDDESKKKFDERFNTKLDLIKSNLDRIVYFRLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.7202 bits (60), Expect = 2.651e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDEPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 2.651e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRAR (50S ribosomal protein L3P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.654e-25
Identity = 70/227 (30.84%), Postives = 108/227 (47.58%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRG--LRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GS+G  PRKRA+    +V+ +P  +  KP  L  F  YKAGM H V   ++P S L+ KE  +AVT+++ PPL           P    LRS   VWA  L + + R                      T   K D+  Q++++++Y  V   +R L  TQ   + G+ +K   L+EI + G  ++ +++ FA     K +    VF   +++D+I VTK
Sbjct:    4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL--------------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQ-PHLSGIGKKTPELLEIPIGGVPNIDERIKFAISLLGKTVSPKDVFSPGQLVDVIAVTK 208

HSP 2 Score: 30.0314 bits (66), Expect = 2.654e-25
Identity = 17/34 (50.00%), Postives = 21/34 (61.76%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRKGACIG 792
            KG+   GVV R+GVT LPR  K  +G R+   IG
Sbjct:  208 KGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIG 241

HSP 3 Score: 30.0314 bits (66), Expect = 2.654e-25
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2

Query:  818 FTVARAGQNGYHHRTEMNKKFTSL 889
            FT  R GQ G+H RTE NK+   +
Sbjct:  249 FTQPRPGQMGFHQRTEYNKRLLKI 272

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METST (50S ribosomal protein L3P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.375e-25
Identity = 72/225 (32.00%), Postives = 108/225 (48.00%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWA-QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKY---CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            +   PR GS+ F PRKR +R   +V  +P+ D +    L AF GYK GMTH+     + GS     E    VTI+E PPL         KT  GL++L  V A  +L++E+ R+                     +     DI+A++E+++        IRVL HT+  K+  + +KK  ++E  + G SV  K+++A     K+I    VFQ+ E  D I  TK
Sbjct:    3 RHHQPRKGSVAFSPRKRVARETPRVSTWPELDEAG---LLAFAGYKVGMTHVTALDSRKGSPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDELSRKI--------------------SVPKFDDIEAKIEELRNKIDDIDEIRVLIHTK-PKLTSVPKKKPEVLEFGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTK 203

HSP 2 Score: 36.5798 bits (83), Expect = 4.375e-25
Identity = 16/31 (51.61%), Postives = 18/31 (58.06%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            W   R  +TVA  GQ GYH RTE NKK   +
Sbjct:  238 WTPNRTMWTVAMQGQMGYHKRTEYNKKLLKI 268

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.459e-25
Identity = 66/227 (29.07%), Postives = 106/227 (46.70%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWA------QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSL F PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG   + KE    VTIIETPPL         +   GL +   V         +++++ + R +  +               + D  +K     LE M K   ++ V A    +      +KK  +ME  + G SV +K ++      K++ +  V ++ E++D+I VTK
Sbjct:    3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPGLT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRKFTFYQLLKRRIATLPKNYTKDDFEQK--LGNLEDMIKEGEIVEVRALVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTK 223

HSP 2 Score: 42.743 bits (99), Expect = 4.459e-25
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            W  ARV +TV  AGQ G+HHRTE+NK+  ++
Sbjct:  256 WHPARVMWTVPMAGQMGFHHRTELNKRLIAI 286

HSP 3 Score: 28.4906 bits (62), Expect = 4.459e-25
Identity = 14/39 (35.90%), Postives = 19/39 (48.72%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            L ++   KG+   G V RWG+     K  +G RK   IG
Sbjct:  216 LDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIG 254

The following BLAST results are available for this feature:

BLAST of EY664716 vs. ExPASy Swiss-Prot

BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80


Match Name	E-value	Identity	Description
RL3_METTH	5.323e-27	31.11	50S ribosomal protein L3P OS=Methanobacterium ther...	[more]
RL3_SULAC	6.905e-27	33.48	50S ribosomal protein L3P OS=Sulfolobus acidocalda...	[more]
RL3_PYRKO	8.960e-27	32.31	50S ribosomal protein L3P OS=Pyrococcus kodakaraen...	[more]
RL3_PYRIL	3.300e-26	31.72	50S ribosomal protein L3P OS=Pyrobaculum islandicu...	[more]
RL3_PYRAE	9.362e-26	31.28	50S ribosomal protein L3P OS=Pyrobaculum aerophilu...	[more]
RL3_THENV	1.215e-25	31.28	50S ribosomal protein L3P OS=Thermoproteus neutrop...	[more]
RL3_SULSO	2.651e-25	30.64	50S ribosomal protein L3P OS=Sulfolobus solfataric...	[more]
RL3_PYRAR	2.654e-25	30.84	50S ribosomal protein L3P OS=Pyrobaculum arsenatic...	[more]
RL3_METST	4.375e-25	32.00	50S ribosomal protein L3P OS=Methanosphaera stadtm...	[more]
RL3_PYRAB	4.459e-25	29.07	50S ribosomal protein L3P OS=Pyrococcus abyssi GN=...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT