EY664716 | Citrus Genome Database

Overview


Name	EY664716
Unique Name	EY664716
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	908

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.782e-25
Identity = 71/233 (30.47%), Postives = 103/233 (44.21%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHL---NEEVRRR---------FYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GSLGF PRKRA     +++++PK+      R+  F GYKAGMTHI+   ++PG   + KE    VTIIETPPL             GL +   V        N   + R         FYK                  T +  +    QLE M K   ++ V A    +      +KK  +ME  + G SV +K ++      K++ +  V ++ E++D+I VTK
Sbjct:    3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG-LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKPKPKMTFYK-----LLERRIATLPKNYTQEMFEQKLGQLEDMIKEGEIVDVRAIVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTK 226

HSP 2 Score: 42.743 bits (99), Expect = 5.782e-25
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889
            W  ARV +TV  AGQ G+HHRTE+NK+  ++
Sbjct:  259 WHPARVMWTVPMAGQMGFHHRTELNKRLIAI 289

HSP 3 Score: 28.4906 bits (62), Expect = 5.782e-25
Identity = 14/39 (35.90%), Postives = 19/39 (48.72%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            L ++   KG+   G V RWG+     K  +G RK   IG
Sbjct:  219 LDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIG 257

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIA (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.513e-25
Identity = 73/237 (30.80%), Postives = 117/237 (49.37%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWA----QHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    Q L+   R R + ++               + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIRSFSSFL--------------KNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 7.513e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 7.513e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.748e-25
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 9.748e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.748e-25
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 9.748e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIM (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.748e-25
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------FSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 9.748e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIL (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.748e-25
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------LSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 9.748e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_SULIK (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.748e-25
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 3

Query:   24 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCT-VWAQHLNE--EVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQ----AQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            M HRK   PR GS G  PRKR+S      + +P+ +   P +L  F+GYK GM+H+    + P S  + KE    VT++E PP+            +G  ++ T  W+    +  ++ RR +                  + D+ KK  +    ++L+ +K     I   R+L  TQ RK+  L +K   L+EIQ+ GG    ++D+A     K+I I  VF++ ++ID++GVTK
Sbjct:    1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRRIHS------------FSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVATQPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTK 222

HSP 2 Score: 27.335 bits (59), Expect = 9.748e-25
Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 2

Query:  836 GQNGYHHRTEMNKKFTSLESHPR 904
            GQ G+H RTE NK+   +   P+
Sbjct:  268 GQLGFHRRTEYNKRIIKIGDDPK 290

HSP 3 Score: 26.1794 bits (56), Expect = 9.748e-25
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRK 777
            KG+   GV+ R+ V  LPR  K  +G RK
Sbjct:  222 KGKGFAGVIKRYSVVELPRWHKHRKGSRK 250

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METS3 (50S ribosomal protein L3P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.764e-25
Identity = 60/222 (27.03%), Postives = 105/222 (47.30%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            +   PR GS+ F PRKRA++   ++K++P++D  K   L    GYK GMTH +V D +K  S  +  +    VT++E PP+         KT RGL+ +  V A +L+EE+ R+                      +  K +  A+++ +      I+VL HT   K+  + +KK  + E  + G +  +K++ A      ++    +  + + +D I  TK
Sbjct:    3 RHHQPRKGSVAFSPRKRAAKETPRIKSWPQNDEPK---LLGLAGYKVGMTHALVTDSDK-NSPTNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITEVLADNLDEELSRKI-----------------SLPKEYNKSEAIAKIQGVLDKTEDIKVLVHTN-PKVTSVPKKKPDIFECGIGGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTK 202

HSP 2 Score: 41.9726 bits (97), Expect = 9.764e-25
Identity = 18/33 (54.55%), Postives = 22/33 (66.67%), Query Frame = 2

Query:  797 WXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895
            W  +R  +TVA+AGQ GYH RTE NKK   + S
Sbjct:  237 WTPSRTMWTVAQAGQMGYHKRTEFNKKILKIAS 269

HSP 3 Score: 23.483 bits (49), Expect = 9.764e-25
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGV 738
            KG+   GVV RWG+
Sbjct:  202 KGKGFQGVVKRWGI 215

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.263e-24
Identity = 61/223 (27.35%), Postives = 99/223 (44.39%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLN-EEVRRRFYKNWCXXXXXXXXXXXXXXE-TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            +   PR GSL + PRKRA     +++ +P++   +  R+  F GYKAGMTH++   + PG     KE    VTI+E PPL         +   GL +   V       E    +  KN                  T++  +    +LE + K   V+ + A    +      +KK  +ME  V G S+ +K ++      K+I +  + Q+ E++DI+ VTK
Sbjct:    3 RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPGLT-KGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLENYPSKRAKNVTFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVELRALVATQPWLARIKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTK 221

HSP 2 Score: 45.4394 bits (106), Expect = 1.263e-24
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877
            +V  +  W  ARV +TV RAGQ G+HHRTE NK+
Sbjct:  247 KVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKR 280

HSP 3 Score: 30.8018 bits (68), Expect = 1.263e-24
Identity = 16/39 (41.03%), Postives = 20/39 (51.28%), Query Frame = 1

Query:  676 LTLLV*PKGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792
            L ++   KG+   G V RWGV     K  +G RK A IG
Sbjct:  214 LDIVAVTKGKGTQGPVKRWGVKLTSHKDSKGRRKVATIG 252

[Close]

BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_CALMQ (50S ribosomal protein L3P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl3p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.762e-24
Identity = 70/224 (31.25%), Postives = 111/224 (49.55%), Query Frame = 3

Query:   36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTP--RGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 698
            K   PR GS+ + PRKRAS    +++ +P  D  KP  L  F+GYKAGM H+    ++  S    KE  +AVT++ETPPL           P    L S+   W  ++  EVR+   +                 +TD    D+Q  L+ +    + I+V+A TQ  K  G+ +K   ++EI V G  ++ ++  +A G   K++    VF+  +++D+IGVTK
Sbjct:    4 KIHRPRRGSMAYYPRKRASDIVPRIRNWPVIDLGKPT-LLGFVGYKAGMVHVTVVDDRKTSPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSVGEAWV-NIPNEVRKYIARR--------IPTLPEKFDTDKALADLQGLLDSV----SYIKVIAMTQPYK-AGVGKKTPEVLEIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTK 212

HSP 2 Score: 30.4166 bits (67), Expect = 2.762e-24
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 2

Query:  812 VSFTVARAGQNGYHHRTEMNKKFTSLESH 898
            V +T  R GQ G+H RTE NK+   +  +
Sbjct:  250 VMYTQPRMGQMGFHRRTEYNKRILKISDN 278

HSP 3 Score: 28.4906 bits (62), Expect = 2.762e-24
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 1

Query:  697 KGRDMXGVVTRWGVTRLPR--KTHRGLRKGACIG 792
            KG+   GV+ R+GV  LPR  K  +G R+   +G
Sbjct:  212 KGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVG 245

The following BLAST results are available for this feature:

BLAST of EY664716 vs. ExPASy Swiss-Prot

BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80


Match Name	E-value	Identity	Description
RL3_PYRFU	5.782e-25	30.47	50S ribosomal protein L3P OS=Pyrococcus furiosus G...	[more]
RL3_SULIA	7.513e-25	30.80	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_SULIY	9.748e-25	30.21	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_SULIN	9.748e-25	30.21	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_SULIM	9.748e-25	30.21	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_SULIL	9.748e-25	30.21	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_SULIK	9.748e-25	30.21	50S ribosomal protein L3P OS=Sulfolobus islandicus...	[more]
RL3_METS3	9.764e-25	27.03	50S ribosomal protein L3P OS=Methanobrevibacter sm...	[more]
RL3_THESM	1.263e-24	27.35	50S ribosomal protein L3P OS=Thermococcus sibiricu...	[more]
RL3_CALMQ	2.762e-24	31.25	50S ribosomal protein L3P OS=Caldivirga maquilinge...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-069-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGGTGCCGATTAGGATGTCTCATCGTAAGTTTGAACACCCA
AGACATGGTTCTTTAGGATTTCTTCCAAGGAAGAGAGCATCCCGCCACAG
AGGAAAAGTGAAGGCCTTTCCCAAGGATGACCCATCAAAACCATGCAGAT
TAACTGCTTTTTTAGGCTACAAAGCTGGAATGACCCATATTGTCAGAGAT
GTTGAAAAGCCAGGATCAAAGCTGCACAAGAAAGAAACATGTGAAGCAGT
AACTATTATTGAAACACCACCCCTGGTGGTTGTTGGGGTCGTTGGTTATG
TCAAGACGCCCCGTGGGCTTCGTTCTCTCTGCACTGTTTGGGCTCAGCAT
CTCAATGAGGAGGTTAGGAGAAGGTTTTACAAGAACTGGTGCAAATCGAA
GAAGAAGGCCTTCACTAAGTATACAAAGAAGTATGAAACTGATGATGGAA
AGAAAGACATTCAGGCTCAGCTGGAGAAAATGAAGAAATACTGCACCGTG
ATTCGTGTTTTGGCCCATACCCAGATCAGAAAAATGAAGGGACTGAAGCA
GAAGAAGGCCCATCTGATGGAGATCCAGGTCAATGGTGGATCAGTTGCCC
AGAAGGTTGACTTTGCTTATGGTTTCTTCGAGAAACAGATTCCTATTGAT
GCTGTGTTCCAGAAAGATGAGATGATTGACATTATTGGTGTGACCAAAGG
GTAGGGATATGANGGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTCCCT
CGTAAGACTCACCGTGGTCTACGCAAGGGTGCTTGTATTGGNTGCCTGGN
CATCCGCTAGGGTCTCCTTTACTGTTGCTAGAGCTGGGCAGAACGGCTAC
CATCACCGTACAGAGATGAACAAGAAATTTACAAGCTTGGAAAGCCACCC
AAGATTCT