EY664716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5) HSP 1 Score: 98.9821 bits (245), Expect = 4.009e-20 Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTK 698 PR GSLGF PRKR++ + ++P DD + F GYKAGMTH+V ++P S E VT+IETPP+ TP G R L VW + E+ R + D ++ I+ E +R++ HT + + +KK +ME +V GGSV+ ++D A E + ++ +F+ E D+ GVTK Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQ--GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL-------------DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTK 208
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_HALSA (50S ribosomal protein L3P OS=Halobacterium salinarium GN=rpl3p PE=3 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20 Identity = 69/220 (31.36%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKM-KKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTK 698 PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K + ET VT++ETPP+ TP G + L VWA +E + R D D +E + + IRV+ HT G+ +K +ME +V GG++A +++FA E VF+ E D G+TK Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL-------------------SVPDEGGDTDELIEALDTEEIADIRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITK 205
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_HALS3 (50S ribosomal protein L3P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.839e-20 Identity = 69/220 (31.36%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKM-KKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTK 698 PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K + ET VT++ETPP+ TP G + L VWA +E + R D D +E + + IRV+ HT G+ +K +ME +V GG++A +++FA E VF+ E D G+TK Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL-------------------SVPDEGGDTDELIEALDTEEIADIRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITK 205
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METBF (50S ribosomal protein L3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl3p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.923e-20 Identity = 59/218 (27.06%), Postives = 95/218 (43.58%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 P+ GSL F PRKRA H + +A+P + + RL F GYK GMTH++ + S E VTIIETP + + G +++ VWA L+ E++RR D + + KM + V IR + +T + + G+ +K +ME ++ + K ++A + I VF+ +ID +T Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRI-----------------PVPKGDNMAETLGNIGKMIEEGKVSDIRAVTYTLPKSLTGVPKKTPDIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAIT 205 HSP 2 Score: 35.039 bits (79), Expect = 7.923e-20 Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 2 Query: 809 RVSFTVARAGQNGYHHRTEMNKKFTSLES 895 RVS+ V + GQ GYH RTE NK+ + S Sbjct: 245 RVSWRVPQMGQTGYHQRTEFNKRILKIGS 273
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METB6 (50S ribosomal protein L3P OS=Methanoregula boonei (strain 6A8) GN=rpl3p PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.932e-20 Identity = 70/222 (31.53%), Postives = 101/222 (45.50%), Query Frame = 3 Query: 36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFY--KNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 K PR GSL F PRKRA K K++P+ + L F GYK GMTH++ + S KE VTIIE P + K G +L +WA+ L+ ++ RR KN+ ++ KK L I LA+TQ M G+ +K LMEI+V GG +A++ ++A+G K+I + V + DI +T Sbjct: 3 KINRPRRGSLAFSPRKRAQSPIPKYKSWPEHSGAPA--LLGFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRRVTSPKNY---------------DSTAAKKKYSDAL--AAGLVAEIYALAYTQPATMSGVPKKVPDLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAIT 205
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.948e-19 Identity = 53/216 (24.54%), Postives = 98/216 (45.37%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IETP + + G +++ WA L+ E++RR +G ++I +E+ + + IR + +T + + G+ +K +ME ++ + K ++A + + VF+ ++D +T Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRI-------------PIPAAGNQAEGLENIGKLIEEGR--VSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAIT 205 HSP 2 Score: 35.8094 bits (81), Expect = 2.948e-19 Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 2 Query: 788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSLES 895 L ++ +RVS+ V + GQ GYH RTE NK+ + S Sbjct: 238 LGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGS 273
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METPE (50S ribosomal protein L3P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl3p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.432e-19 Identity = 62/216 (28.70%), Postives = 94/216 (43.52%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 PR GSL + PRKRA K ++P D +P L +F GYK GMTH++ + S K+ VTIIE PP+ G R+L VW + L+ + RR + G K + + T + L +TQ + G+ +K LME+ + GG++ QKV+FA ++ + V E D+ +T Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPARD-GEPI-LQSFAGYKVGMTHVIMVDDHKNSPTEGKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWTEQLSTLLGRRI-------------TLPKKYSEEAGFKALSEAV--AAGTVTELHALMYTQPDTLTGVPKKVPELMEVCIGGGTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAIT 205 HSP 2 Score: 28.8758 bits (63), Expect = 8.432e-19 Identity = 12/34 (35.29%), Postives = 17/34 (50.00%), Query Frame = 2 Query: 788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889 L W V + V + GQ GY RT+ NK+ + Sbjct: 238 LGPWNPHHVRWQVPQMGQMGYQQRTDFNKRILKI 271
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METMJ (50S ribosomal protein L3P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.432e-19 Identity = 57/220 (25.91%), Postives = 100/220 (45.45%), Query Frame = 3 Query: 36 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 K PR GSL + PRKRA + ++P+ + + F GYK GMTH++ + S K+ VT++E PP+ + G +L W L+EE+ RR +T + ++A + + K + + LA+T+ ++ G+ +K LME+++ GGS+ ++ +A K+I I + E +D+ VT Sbjct: 3 KINRPRRGSLAYSPRKRAKSPVPRYGSWPEYTGAPAVQ--GFAGYKVGMTHVIMVDDHKSSPTEGKDVMVPVTVVEVPPMRVAGVRAYGEDTYGKHALTEAWTTDLDEELSRRI-------------NVPKNHDTAAALEAVKAAVGEGK--VSELYALAYTRPMELTGVPKKVPDLMEMRIAGGSLEDQIAYAAEILGKEITISGNLEVGEYVDVTAVT 205 HSP 2 Score: 30.0314 bits (66), Expect = 8.432e-19 Identity = 13/34 (38.24%), Postives = 17/34 (50.00%), Query Frame = 2 Query: 788 LXAWXSARVSFTVARAGQNGYHHRTEMNKKFTSL 889 L W V + V + GQ GY RTE NK+ + Sbjct: 238 LGPWHPHHVRWQVPQMGQMGYQQRTEFNKRILKI 271
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_PIG (60S ribosomal protein L3 (Fragment) OS=Sus scrofa GN=RPL3 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 1.011e-18 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2 Query: 776 RVLVLXAWXSARVSFTVARAGQNGYHHRTEMNKK 877 +V + AW AR +F+VARAGQ GYHHRTE+NKK Sbjct: 47 KVACIGAWHPARXAFSVARAGQKGYHHRTEINKK 80 HSP 2 Score: 48.9062 bits (115), Expect = 1.011e-18 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 697 KGRDMXGVVTRWGVTRLPRKTHRGLRKGACIG 792 KG+ GV +RW +LPRKTHRGLRK ACIG Sbjct: 21 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 52 HSP 3 Score: 33.8834 bits (76), Expect = 1.011e-18 Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 636 QIPIDAVFQKDEMIDIIGVTK 698 ++P++ VF +DEMID+IGVTK Sbjct: 1 RVPVNQVFGQDEMIDVIGVTK 21
BLAST of EY664716 vs. ExPASy Swiss-Prot
Match: RL3_METAC (50S ribosomal protein L3P OS=Methanosarcina acetivorans GN=rpl3p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 51/216 (23.61%), Postives = 98/216 (45.37%), Query Frame = 3 Query: 48 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCXXXXXXXXXXXXXXETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 695 P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IETP + + G +++ VWA L+ E++RR + ++I +E+ + + +R + +T + + G+ +K +ME ++ + K +++ + + VF+ ++D +T Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRI-------------PIPAAGNQAEALENIGKLIEEGR--VSDVRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAIT 205 The following BLAST results are available for this feature:
BLAST of EY664716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664716 ID=EY664716; Name=EY664716; organism=Citrus sinensis; type=EST; length=908bpback to top |