CX043648

Overview
NameCX043648
Unique NameCX043648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_MOUSE (UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49
Identity = 94/150 (62.67%), Postives = 109/150 (72.67%), Query Frame = -3
Query:  329 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 778
            +IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY+T+DGTGVRDYIHV+DLA GHIAAL KL + + GC  YNLGTG G SVL+MV A EKASGKKIP     RR GD    YA+   A  EL W A  G+D MC D W W  +NP G+
Sbjct:  195 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 343          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_DICDI (UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.534e-48
Identity = 90/149 (60.40%), Postives = 108/149 (72.48%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGTGVRD+IHV+DLA GHI+AL  L   K GC  YNLGTG+G SVLEMV A ++AS K+IP     RR GD    +A   KA +EL WKA +  D+MCRD W W S NP GY
Sbjct:  193 IGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGY 341          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.872e-48
Identity = 90/151 (59.60%), Postives = 111/151 (73.51%), Query Frame = -3
Query:  329 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD-PKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 778
            +IGEDP G PNNLMP++ QVAVGRRP L+V+G+D+ T DGTGVRDYIH++DLA+GH+ AL KL +  + G   YNLGTG G SVL+MV AFEKASGKK+      RR GD    YA    A+++L WKA+ GID+MC D W W S+NP GY
Sbjct:  197 RIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRWQSQNPNGY 347          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.939e-46
Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            +GEDP+GIPNNLMP++ QVAVGRR  L VFG DY T+DGTGVRDYIHV+DLADGH+ A+ KL D K G  +YNLG G G+SVL++V AF KA GK I    + RR GD    +A   KA+RELNW+    +DEM +D W+W S++P GY
Sbjct:  189 MGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAD-KSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.939e-46
Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            +GEDP+GIPNNLMP++ QVAVGRR  L VFG DY T+DGTGVRDYIHV+DLADGH+ A+ KL D K G  +YNLG G G+SVL++V AF KA GK I    + RR GD    +A   KA+RELNW+    +DEM +D W+W S++P GY
Sbjct:  189 MGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAD-KSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.144e-45
Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGVRDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK +    + RR GD    +A   KA+RELNW+    +DEM +D W+W S++P GY
Sbjct:  189 MGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.800e-45
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = -3
Query:  326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775
            IGEDP GIPNNLMPF++QVAVG+ P+L+VFG DY+T DGTGVRDYIHV+DLA GH+ AL K  +   G  VYNLGTG G SVL+MV AFE A+G  IP     RRPGD  + Y++  KA  +L W+ + G+++M +D WNW   NP GY+
Sbjct:  189 IGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQN-DAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPNGYK 337          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.237e-45
Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDP GIPNNL+P+++QVA+G+ P+L+VFG+DY T DGTGVRDYIHV+DLA GH+ AL +  +   G  +YNLGTG G SVL+MV AFEK +  KIP     RRPGD    Y+    A+ ELNW A  G+++M +D W+W  KNP GY
Sbjct:  189 IGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDLAIGHLKALDR-HEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDRRPGDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHWQKKNPKGY 336          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.390e-44
Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = -3
Query:  332 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYG 778
            ++GEDP GIPNNL+P++ QVA+GR  +L +FG DY T+DGTGVRDYIHV+DLA+GH+ AL  L   + G + YNLG GKG SVLEMV AFEKASG  +    S RR GD    +A    A++ELNW+   GIDEM RD WNW S+NP G
Sbjct:  188 QMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGVRDYIHVMDLAEGHLKALDHLSAIE-GYKAYNLGAGKGYSVLEMVKAFEKASGGTVAYQISPRRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNWQSQNPQG 335          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GAL10_PACTA (Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.370e-44
Identity = 85/152 (55.92%), Postives = 113/152 (74.34%), Query Frame = -3
Query:  326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIG--CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775
            IGEDP GIPNNL+PF+ QVA+GRR +L+VFG+DY++KDGT +RDYIHVIDLA GHIAAL+ L + K    C  +NLGTG G++V E+  AF +A GKK+P    GRR GD   + A+  +A  EL WKA+  I++ C+D WNW +KNP+G++
Sbjct:  193 IGEDPLGIPNNLLPFLAQVAIGRREKLSVFGSDYNSKDGTPIRDYIHVIDLAKGHIAALNYLFNHKDNGLCREWNLGTGNGSTVFEVFNAFCEAVGKKLPFEVVGRRDGDVLNLTANPKRANTELKWKAQLSINDACKDLWNWTTKNPFGFQ 344          
The following BLAST results are available for this feature:
BLAST of CX043648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE_MOUSE1.098e-4962.67UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE... [more]
GALE_DICDI3.534e-4860.40UDP-glucose 4-epimerase OS=Dictyostelium discoideu... [more]
GALE_DROME7.872e-4859.60Probable UDP-glucose 4-epimerase OS=Drosophila mel... [more]
GALE_SALTY1.939e-4659.06UDP-glucose 4-epimerase OS=Salmonella typhimurium ... [more]
GALE_SALTI1.939e-4659.06UDP-glucose 4-epimerase OS=Salmonella typhi GN=gal... [more]
GALE_ECOLI2.144e-4557.05UDP-glucose 4-epimerase OS=Escherichia coli (strai... [more]
GALE_PASHA2.800e-4558.00UDP-glucose 4-epimerase OS=Pasteurella haemolytica... [more]
GALE_PASMU6.237e-4556.38UDP-glucose 4-epimerase OS=Pasteurella multocida G... [more]
GALE_ERWAM1.390e-4458.39UDP-glucose 4-epimerase OS=Erwinia amylovora GN=ga... [more]
GAL10_PACTA2.370e-4455.92Bifunctional protein GAL10 OS=Pachysolen tannophil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12E09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E09-I18-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043648 ID=CX043648; Name=CX043648; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTGCAAGAAAGGAAGAAAATCTTTAAATTAATAAGCTGA
AAATTTGAAGACCAATAATCAACACACCAATGACACTGTTCCAAATAAGG
GAATGCCTAGATAAATCTTCACAGTAGAAGATTGTATAGGGGACCTTCTA
TTGTTGTACAATACCACAAGGAGATTGTATAGGGGACCTTCTATTGTTGT
ACAATACCACAAGGTTTTTCAGCTTAAAAATCTGATAATTAAGTGTACAG
AATAGACACTGTATATAGCGAGGAACTACTAAGAAGGATGACAAATGACA
GTTATTAGCTAGTCGAGTTGGAAGATTCATAGCCATAAGGGTTCTTGCTG
GCCCAATTCCATTGATCCCTACACATCTCGTCAATGCCATATTTTGCCTT
CCAATTCAATTCACGTTCTGCCTTTCCTGTTGATGCATAAACAATTTCTG
CGTCACCGGGTCGCCTCCCAGACTTTACAAGAGGAATTTTCTTTCCAGAG
GCTTTTTCAAATGCTGCAACCATCTCCAAAACTGATGTCCCTTTTCCCGT
TCCCAAGTTGTACACCTCACAACCTATCTTAGGATCATCAAGCTTATGCA
ATGCAGCAATGTGCCCATCAGCTAAGTCAATAACATGAATGTAATCACGG
ACCCCAGTACCATCCTTTGTTGAGTAATCAGTTCCAAATACTGTCAGCTC
TGGACGCCTGCCAACAGCAACTTGAGTGACGAAGGGCATGAGATTGTTTG
GAATTCCACGGGGATCCTCACCAATTTTGC
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