CX043648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_MOUSE (UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49 Identity = 94/150 (62.67%), Postives = 109/150 (72.67%), Query Frame = -3 Query: 329 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 778 +IGEDP+GIPNNLMP+V+QVA+GRR L VFG DY+T+DGTGVRDYIHV+DLA GHIAAL KL + + GC YNLGTG G SVL+MV A EKASGKKIP RR GD YA+ A EL W A G+D MC D W W +NP G+ Sbjct: 195 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 343
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_DICDI (UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.534e-48 Identity = 90/149 (60.40%), Postives = 108/149 (72.48%), Query Frame = -3 Query: 329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775 IGEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGTGVRD+IHV+DLA GHI+AL L K GC YNLGTG+G SVLEMV A ++AS K+IP RR GD +A KA +EL WKA + D+MCRD W W S NP GY Sbjct: 193 IGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGY 341
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.872e-48 Identity = 90/151 (59.60%), Postives = 111/151 (73.51%), Query Frame = -3 Query: 329 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD-PKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 778 +IGEDP G PNNLMP++ QVAVGRRP L+V+G+D+ T DGTGVRDYIH++DLA+GH+ AL KL + + G YNLGTG G SVL+MV AFEKASGKK+ RR GD YA A+++L WKA+ GID+MC D W W S+NP GY Sbjct: 197 RIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRWQSQNPNGY 347
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.939e-46 Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = -3 Query: 329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775 +GEDP+GIPNNLMP++ QVAVGRR L VFG DY T+DGTGVRDYIHV+DLADGH+ A+ KL D K G +YNLG G G+SVL++V AF KA GK I + RR GD +A KA+RELNW+ +DEM +D W+W S++P GY Sbjct: 189 MGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAD-KSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.939e-46 Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = -3 Query: 329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775 +GEDP+GIPNNLMP++ QVAVGRR L VFG DY T+DGTGVRDYIHV+DLADGH+ A+ KL D K G +YNLG G G+SVL++V AF KA GK I + RR GD +A KA+RELNW+ +DEM +D W+W S++P GY Sbjct: 189 MGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAD-KSGVHIYNLGAGVGSSVLDVVNAFSKACGKPINYHFAPRRDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.144e-45 Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = -3 Query: 329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775 +GEDP+GIPNNLMP++ QVAVGRR L +FG DY T+DGTGVRDYIHV+DLADGH+ A+ KL + K G +YNLG G G SVL++V AF KA GK + + RR GD +A KA+RELNW+ +DEM +D W+W S++P GY Sbjct: 189 MGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.800e-45 Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = -3 Query: 326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775 IGEDP GIPNNLMPF++QVAVG+ P+L+VFG DY+T DGTGVRDYIHV+DLA GH+ AL K + G VYNLGTG G SVL+MV AFE A+G IP RRPGD + Y++ KA +L W+ + G+++M +D WNW NP GY+ Sbjct: 189 IGEDPNGIPNNLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQN-DAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPNGYK 337
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.237e-45 Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = -3 Query: 329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775 IGEDP GIPNNL+P+++QVA+G+ P+L+VFG+DY T DGTGVRDYIHV+DLA GH+ AL + + G +YNLGTG G SVL+MV AFEK + KIP RRPGD Y+ A+ ELNW A G+++M +D W+W KNP GY Sbjct: 189 IGEDPNGIPNNLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHVVDLAIGHLKALDR-HEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDRRPGDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHWQKKNPKGY 336
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.390e-44 Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = -3 Query: 332 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYG 778 ++GEDP GIPNNL+P++ QVA+GR +L +FG DY T+DGTGVRDYIHV+DLA+GH+ AL L + G + YNLG GKG SVLEMV AFEKASG + S RR GD +A A++ELNW+ GIDEM RD WNW S+NP G Sbjct: 188 QMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGVRDYIHVMDLAEGHLKALDHLSAIE-GYKAYNLGAGKGYSVLEMVKAFEKASGGTVAYQISPRRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNWQSQNPQG 335
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GAL10_PACTA (Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.370e-44 Identity = 85/152 (55.92%), Postives = 113/152 (74.34%), Query Frame = -3 Query: 326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIG--CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775 IGEDP GIPNNL+PF+ QVA+GRR +L+VFG+DY++KDGT +RDYIHVIDLA GHIAAL+ L + K C +NLGTG G++V E+ AF +A GKK+P GRR GD + A+ +A EL WKA+ I++ C+D WNW +KNP+G++ Sbjct: 193 IGEDPLGIPNNLLPFLAQVAIGRREKLSVFGSDYNSKDGTPIRDYIHVIDLAKGHIAALNYLFNHKDNGLCREWNLGTGNGSTVFEVFNAFCEAVGKKLPFEVVGRRDGDVLNLTANPKRANTELKWKAQLSINDACKDLWNWTTKNPFGFQ 344 The following BLAST results are available for this feature:
BLAST of CX043648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043648 ID=CX043648; Name=CX043648; organism=Citrus sinensis; type=EST; length=780bpback to top |