CX043648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.069e-24 Identity = 61/131 (46.56%), Postives = 74/131 (56.49%), Query Frame = -3 Query: 329 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGY 718 A+G P L V GTDY T DGT +RDYI V DL D H+ AL K K+G +YN+GTG G SV E V A + A+G I + RRPGD VY+ K ELNW A+Y + E W W +P GY Sbjct: 260 ALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVG--IYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYAEVYSDPSKIHDELNWTARYIDLRESLSTAWKWQKAHPNGY 388
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.069e-24 Identity = 61/131 (46.56%), Postives = 76/131 (58.02%), Query Frame = -3 Query: 329 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGY 718 A G P L + GTDY T DGT VRDYI V DL D H+ AL K K+G +YN+GTGKG+SV E V A +KA+G +I + RR GD VY+ K +ELNW AK+ + E W W + GY Sbjct: 281 ARGIMPGLQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVG--IYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGY 409
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 62/152 (40.79%), Postives = 86/152 (56.58%), Query Frame = -3 Query: 326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAAL-HKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGYE 775 IGED +L+P + + A+ + T+FG DY TKDGT VRDY+ V DL D HI AL H + K +V+NLGT G S LE++ + +K +G IP RR GD + + A + KA L WK K+ +D++ W W +P GYE Sbjct: 180 IGED-HAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHMMKTNK--SDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPKHENVDDVIATAWKWHKSHPKGYE 328
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = -3 Query: 332 MPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCE--VYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYG 739 +P A+GRR VFGTDY T+DGT VRDYIHV+DLAD H+ A+ L + G E NLGTG GT+V E++ A EK + + + + RR GD+ + A+ KA + L W+ +Y + + WNW S+ G Sbjct: 193 IPLAIDAALGRREGFKVFGTDYDTRDGTCVRDYIHVLDLADAHVRAVDYLLE---GGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQYDLAAITESAWNWHSRRNQG 327
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 57/145 (39.31%), Postives = 90/145 (62.07%), Query Frame = -3 Query: 344 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWK-AKYGIDEMCRDQWNWASK 775 +GE+ R I +L+P V QVA+G R ++ +FG D+ T+DGT +RDYIH+ DLAD HI AL + + ++NLG+G+G SV +++ + +G IP + RR GD ++ AS+ KA+ EL WK + + + D W + S+ Sbjct: 176 VGEN-REIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQ--SNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPRRAGDPAVLIASSAKAQSELGWKPQRTDLHTIVSDAWAFTSQ 317
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 60/148 (40.54%), Postives = 79/148 (53.38%), Query Frame = -3 Query: 353 GEDPRGIPNNLMPFVT-------QVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYG-IDEMCRDQWNW 772 G DP G P T Q +GRRP L +FGTDY T DGT +RDYIHV DLAD H+ AL L G + N G G+G SV E+V E+ SG+++P + RRPGD + A + +L W K+ +D + R +W Sbjct: 181 GADPAGRTGQATPVATHLIKVACQALLGRRPPLAIFGTDYDTPDGTCIRDYIHVSDLADAHVLALLHLRRGG-GSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGIVRSALSW 327
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = -3 Query: 329 AVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWASKNPYGY 718 A G P L + GTDY T DGT VRDYI V DL D H+ AL K K+G ++N+GTGKG+SV E V A +KA+G I + RR GD VY+ K + ELNW AK+ + E + W W + GY Sbjct: 280 ARGIIPGLQIKGTDYKTVDGTCVRDYIDVTDLVDAHVKALEKAKPRKVG--IFNVGTGKGSSVKEFVEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLHRSGY 408
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_STRLI (UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 9.690e-22 Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = -3 Query: 326 NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 748 ++L+P V QVA GRR ++V+G DY T D T VRDYIHV DLA+ H+ A+ + P + NLG G G SV E+V + +G IP + + RR D ++ AS G A +L W + D W W S +P GY+ Sbjct: 189 SHLIPLVLQVAQGRREAISVYGDDYPTPD-TCVRDYIHVADLAEAHLLAVRRR--PGNEHLICNLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPSRADLAIVSDAWEWHSSHPKGYD 326
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_CORGL (UDP-glucose 4-epimerase OS=Corynebacterium glutamicum GN=galE PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = -3 Query: 347 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKY-GIDEMCRDQWNWAS 775 IGE+ R + +L+P V QVA G R + +FG D+ T DGT VRDYIH++DLA H+ AL + K ++NLG+G G SV ++V + +G IP + RR GD + AS+ KA++EL W ++ + + D W + S Sbjct: 176 IGEN-REVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIHILDLAKAHVLALESNEAGK--HRIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVAPRRAGDPATLIASSEKAKQELGWTPEHTDLRTIVEDAWAFTS 316
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_MYCPN (UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae GN=galE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = -3 Query: 362 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYNLGTGKGTSVLEMVAAFEKA-SGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQ 754 IPN + F+ + ++G DY TKDG+ +RDYIHV+DL D H+ A L +PK+ E +NLG+G+G S E++ + + +++ L RR GD ++ KA+R LN++ + +M D+ Sbjct: 201 IPNLIKAFM------EKRTFFLYGDDYDTKDGSCIRDYIHVVDLCDAHLLAWKWLQANPKVRFESFNLGSGQGFSNWEVINTAQAIFAPEQLQLKIESRRAGDPPVLVVDCTKAKRLLNFQPTRSLHKMLSDE 327 The following BLAST results are available for this feature:
BLAST of CX043648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043648 ID=CX043648; Name=CX043648; organism=Citrus sinensis; type=EST; length=780bpback to top |