CX043648

Overview
NameCX043648
Unique NameCX043648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_MYCGE (UDP-glucose 4-epimerase OS=Mycoplasma genitalium GN=galE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.081e-12
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = -3 
Query:  353 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPK-IGCEVYNLGTGKGTSVLEMVAAFEKA-SGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNW 754
            IPN +  F+ Q          ++G DY+TKDG+ +RDYIHV D+ + H      L+D + I  E +NLG+G GTS LE++   +K     ++ L    +R  D  I+ A+  KA++   +K    + +M  D+ N+
Sbjct:  202 IPNLVKAFLKQTP------FFLYGNDYATKDGSCIRDYIHVYDICNAHFLLWKWLNDHRQIKFETFNLGSGIGTSNLEVIDIAKKVFYPSRLNLEIRPKRSWDPAILVANVAKAKQTFQFKITRNLKDMISDERNF 331
The following BLAST results are available for this feature:
BLAST of CX043648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE_MYCGE4.081e-1233.09UDP-glucose 4-epimerase OS=Mycoplasma genitalium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12E09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E09-I18-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043648 ID=CX043648; Name=CX043648; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTGCAAGAAAGGAAGAAAATCTTTAAATTAATAAGCTGA
AAATTTGAAGACCAATAATCAACACACCAATGACACTGTTCCAAATAAGG
GAATGCCTAGATAAATCTTCACAGTAGAAGATTGTATAGGGGACCTTCTA
TTGTTGTACAATACCACAAGGAGATTGTATAGGGGACCTTCTATTGTTGT
ACAATACCACAAGGTTTTTCAGCTTAAAAATCTGATAATTAAGTGTACAG
AATAGACACTGTATATAGCGAGGAACTACTAAGAAGGATGACAAATGACA
GTTATTAGCTAGTCGAGTTGGAAGATTCATAGCCATAAGGGTTCTTGCTG
GCCCAATTCCATTGATCCCTACACATCTCGTCAATGCCATATTTTGCCTT
CCAATTCAATTCACGTTCTGCCTTTCCTGTTGATGCATAAACAATTTCTG
CGTCACCGGGTCGCCTCCCAGACTTTACAAGAGGAATTTTCTTTCCAGAG
GCTTTTTCAAATGCTGCAACCATCTCCAAAACTGATGTCCCTTTTCCCGT
TCCCAAGTTGTACACCTCACAACCTATCTTAGGATCATCAAGCTTATGCA
ATGCAGCAATGTGCCCATCAGCTAAGTCAATAACATGAATGTAATCACGG
ACCCCAGTACCATCCTTTGTTGAGTAATCAGTTCCAAATACTGTCAGCTC
TGGACGCCTGCCAACAGCAACTTGAGTGACGAAGGGCATGAGATTGTTTG
GAATTCCACGGGGATCCTCACCAATTTTGC
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