EY720587

Overview
NameEY720587
Unique NameEY720587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECOBW (Serine hydroxymethyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO8A (Serine hydroxymethyltransferase OS=Escherichia coli O8 (strain IAI1) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO81 (Serine hydroxymethyltransferase OS=Escherichia coli O81 (strain ED1a) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO7I (Serine hydroxymethyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO5E (Serine hydroxymethyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO57 (Serine hydroxymethyltransferase OS=Escherichia coli O157:H7 GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO55 (Serine hydroxymethyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO45 (Serine hydroxymethyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO27 (Serine hydroxymethyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
[Close]
BLAST of EY720587 vs. ExPASy Swiss-Prot
Match: GLYA_ECO24 (Serine hydroxymethyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.250e-55
Identity = 111/229 (48.47%), Postives = 153/229 (66.81%), Query Frame = 2 
Query:   32 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAHVGDTTTHKSLPGPRGTMISFRTGVTDI 718
            +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG+IDY  LEK A   +PK+I+ G SAY+ + D+ ++R++ +   A +  DMAH++GLVAAGV P+P  +AHV  TTTHK+L GPRG +I  + G  ++
Sbjct:   30 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEEL 248
The following BLAST results are available for this feature:
BLAST of EY720587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_ECOBW4.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO8A4.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO814.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO7I4.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO5E4.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO574.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO554.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO454.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO274.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECO244.250e-5548.47Serine hydroxymethyltransferase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-E09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720587 ID=EY720587; Name=EY720587; organism=Citrus sinensis; type=EST; length=818bp
CACGCGTCCGTTTTGTGTGATTTTGAAGGGACTTGAACTCATTCCTTCAG
AGAACTTTACTTCAGTATCCGTGATGCAAGCTGTGGGGTCTGTCATGACC
AACAAGTACAGTGAAGGATATCCAGGTGCAAGATATTATGGAGGAAACGA
GTATATTGACATGGCGGAATCCTTATGTCAGAAGCGAGCCCTGGAAGCAT
TTCGGTTGGATCCTGAAAAATGGGGAGTGAATGTGCAGTCTCTGTCTGGA
TCTCCATCTAATTTTCAAGTCTACACTGCATTGTTAAAACCTCATGATAG
GATCATGGCACTTGATCTTCCTCATGGTGGGCATCTCTCACACGGCTATC
AGACAGATACCAAAAAGATATCTGCAGTGTCCATATTTTTTGAGACAATG
CCATACAGATTGAATGAGAGCACTGGCTATATAGACTATGACCAGTTGGA
GAAAAGTGCCACCCTCTTCAGGCCAAAATTGATTGTTGCTGGTGCTAGTG
CTTATGCACGATTGTATGATTATGAGCGTATTCGCAAGGTTTGCAACAAA
CAAAAAGCTATAATGTTGGCAGATATGGCACACATTAGTGGGTTGGTTGC
TGCTGGTGTCATCCCTTCACCTTTTGAGTATGCACATGTTGGTGACACCA
CAACTCACAAATCACTTCCTGGGCCACGTGGCACCATGATCTCCTTTAGG
ACGGGAGTGACAGACATTACAAACCCGGGAAGGGGGTGTCTCTGATTATG
AAGAGAAAGGAAGTCAGCGGGCTTGCGTGAAGGCCAGGTGGGCGGAATAG
CGGGGGATTAGTGGTTAG
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