EG358356

Overview
NameEG358356
Unique NameEG358356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26
Identity = 72/181 (39.78%), Postives = 105/181 (58.01%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKS-EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536
            TGEDGFEI +P++ AV+L + I+E   E  ++  GLGARD+LR EAGL LYGN++ + +TP+EAG  + +   +  +G F+G + +LKQ +EG   + VGF     G P   +    D Q   IG +T+G FSP LKKNI +  + S   + G +++I +R K     I    F    Y K
Sbjct:  193 TGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLGARDTLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRADNQ--KIGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_THEM4 (Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvT PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.500e-26
Identity = 71/172 (41.28%), Postives = 98/172 (56.98%), Query Frame = 3
Query:    3 TGEDGFEI-SVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFEI +   +  + + K +L  +   V   GLGARD LRLEA L LYGNDM++ +TP+E G+ WA+    + E  F+G E + +QL+EG   R  GF         H     + G  IG +TSG FSP L + I M  ++ G +K+G  ++IE+R K     I KMPF
Sbjct:  189 TGEDGFEIYTTDKDGIIKIWKKLLNLN---VIPAGLGARDCLRLEASLLLYGNDMDETITPLEVGIKWAV----KFEKDFMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEKG-YKSGEIIEIEIRNKLVKAEIVKMPF 352          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.265e-26
Identity = 71/180 (39.44%), Postives = 102/180 (56.67%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 542
            TGEDGFE+ + +E    L   +  ++EG +   GLG+RD+LRLEA + LYG DM+ + TP EAGL W +     A   F+G   + +Q ++GP  R VG    G     H        N +GEITSG +SP L + IA+GY+ + L + G +V +E+RGK +   + K PF    Y +PS
Sbjct:  202 TGEDGFELLLEAEAGRALWLQL--RAEGVIPC-GLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVAVEIRGKHHPATVVKRPF----YRRPS 372          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 71/182 (39.01%), Postives = 108/182 (59.34%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKS-EGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536
            TGEDGFEI +P++ AV+L + I+E   E  ++  GLGARD+LR EAGL LYGN++ + +TP+EAG  + +   +  +G F+G + +LKQ +EG   + VGF     G P   +  + H+++   IG +T+G FSP LKKNI +  + S   + G +++I +R K     I    F    Y K
Sbjct:  193 TGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGARDTLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRAHNQK---IGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_ANASP (Aminomethyltransferase OS=Anabaena sp. (strain PCC 7120) GN=gcvT PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.569e-26
Identity = 68/171 (39.77%), Postives = 94/171 (54.97%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFEI V  E  V+L +++ +     V   GLGARD+LRLEA + LYG D++ + TP+EAGL W +      +G F+G   + +Q   G   R +G    G     H       G  +G +TSG  SP L   +A+ YV S L K G  +++E+RGKAY   + K PF
Sbjct:  204 TGEDGFEILVDPEVGVELWRSLYDAG---VIPCGLGARDTLRLEAAMALYGQDIDDNTTPLEAGLGWLV--HLDTKGDFIGRSVLEQQKATGVQRRLIGLQTQGRNIARHGYQVLSDGKVVGGVTSGTLSPTLGYPVALAYVPSKLAKVGQPLEVEIRGKAYPAVVVKRPF 369          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SYNY3 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=gcvT PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.241e-25
Identity = 72/171 (42.11%), Postives = 92/171 (53.80%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFEI V  E    L +T   K    V   GLGARD+LRLEAG+ LYG DM    TP+EAGL W +     ++G F+G   + +Q   G   R VG          H       G  +G +TSG  SP L+K IA+GYV + L K G ++++EVRGK Y   + K  F
Sbjct:  199 TGEDGFEIMVSPEVGKQLWQTFGSKG---VTPCGLGARDTLRLEAGMGLYGQDMNDETTPLEAGLGWLV--HLDSKGDFIGRAVLTEQKANGVEKRLVGLEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPTELAKVGQELEVEVRGKTYGIKVVKKLF 364          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SYNR3 (Aminomethyltransferase OS=Synechococcus sp. (strain RCC307) GN=gcvT PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.116e-25
Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFE+ + +     L + +LE     V   GLGARDSLRLEA + LYGNDM+ + +P+E GL W +      E  F+G E + +Q  EG   + VG    G     H       G P+G +TSG FSP L+  +A+  V++ L K G ++ +E+RG+     + K PF
Sbjct:  189 TGEDGFELLLTASAGQSLWRQLLEDG---VAPCGLGARDSLRLEAAMHLYGNDMDANTSPLECGLGWLVHLEMPIE--FVGREALERQTAEGVSRKLVGLQLQGRAIARHDYPVLHNGEPVGVVTSGTFSPTLEHPVALASVRADLAKLGNELMVEIRGRQEPAVVVKRPF 354          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_NEIMA (Aminomethyltransferase OS=Neisseria meningitidis serogroup A GN=gcvT PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDG E+ +P   AV   K +       V+  GLGARD+LR+EAG+ LYGNDM+   +P+EAG+ W +  +  +   F+G   +L   ++G  V++VG   G G   R+H +V  ++G   GE TSG FSP LK++IA+  V       G   K+ +RGK  D  + K+PFV
Sbjct:  194 TGEDGVEVILPGTEAVAFFKAL---QAAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGK--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLIRGKEADVRVLKLPFV 358          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_GEOKA (Aminomethyltransferase OS=Geobacillus kaustophilus GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFE+   +E A  L + IL   +   V   GLGARD+LR EA L LYG ++   ++PVEAGL +A+  +   E  F+G   + +Q +EGPP R VG          H  +    G  +G +T+G  SP LKKNI +  VK+ +   G +V++++RGK    NI  +PF
Sbjct:  190 TGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTLRFEACLPLYGQELSDSISPVEAGLGFAV--KTEKETPFIGQAVLKRQKEEGPPRRLVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVAAIGREVEVDIRGKRLKANIVPIPF 359          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_DESHY (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK--SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536
            TGEDGFEI +P E A  + + ILE   SEG V+  GLGARD+LR EA L LYGN++   +TP+EAGL + +   +  +  F+G E +  Q ++G P + VG        ARSH  +  E G  IG ITSG FSP L KNIA+G +     + G  + + +RGKA      K   +P+ +YK
Sbjct:  192 TGEDGFEIYLPPEHAPRMWERILEVGGSEG-VQPIGLGARDTLRFEARLPLYGNELGPDITPLEAGLGFFV---KLEKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKE-GKEIGFITSGSFSPTLNKNIALGLIPPEYAQIGETLDVIIRGKA-----VKARIIPSLFYK 362          
The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
GCST_THEP32.500e-2639.78Aminomethyltransferase OS=Thermoanaerobacter pseud... [more]
GCST_THEM42.500e-2641.28Aminomethyltransferase OS=Thermosipho melanesiensi... [more]
GCST_PROM33.265e-2639.44Aminomethyltransferase OS=Prochlorococcus marinus ... [more]
GCST_THEPX5.569e-2639.01Aminomethyltransferase OS=Thermoanaerobacter sp. (... [more]
GCST_ANASP5.569e-2639.77Aminomethyltransferase OS=Anabaena sp. (strain PCC... [more]
GCST_SYNY31.241e-2542.11Aminomethyltransferase OS=Synechocystis sp. (strai... [more]
GCST_SYNR32.116e-2538.60Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_NEIMA3.610e-2539.88Aminomethyltransferase OS=Neisseria meningitidis s... [more]
GCST_GEOKA3.610e-2539.53Aminomethyltransferase OS=Geobacillus kaustophilus... [more]
GCST_DESHY3.610e-2542.54Aminomethyltransferase OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank description3g1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003g1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bp
ACACTGGTGAAGATGGATTTGAAATCTCTGTTCCATCTGAGCGTGCAGTG
GATCTTGCCAAAACAATTCTGGAGAAATCTGAAGGAAAGGTGAGGTTGAC
AGGTCTCGGTGCTCGAGACAGTCTCCGACTTGAAGCTGGCTTATGTTTAT
ATGGTAATGACATGGAACAACACGTGACACCTGTAGAAGCTGGACTGACA
TGGGCCATAGGAAAGAGGAGGAGAGCAGAAGGTGGCTTTCTAGGTGCTGA
GAAAATACTCAAACAACTTGACGAAGGTCCGCCAGTCAGACGTGTTGGAT
TCTTCGCTGGAGGTCCGCCTGCCAGATCACACAGTAAGGTTCACGATGAG
CAAGGGAATCCCATTGGAGAAATTACCAGTGGAGGATTCAGCCCCTGCCT
CAAGAAGAATATAGCCATGGGATATGTAAAATCTGGATTGCACAAGGCAG
GCACAAAAGTTAAGATTGAGGTTCGAGGAAAAGCCTACGATGGAAACATC
ACTAAAATGCCATTTGTGCCAACAAAATACTACAAGCCGTCTTAG
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