EG358356

Overview
NameEG358356
Unique NameEG358356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_FRATH (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 60/172 (34.88%), Postives = 84/172 (48.84%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFE+ +P+ +      ++LE      +  GLGARD+LRLEAG+ LYG DM+   TP+E GL W++         F+G +  L +  +G   + VG            +  D      G ITSG FSP LK  I + YV     K      + +RGK  +  + K  FV
Sbjct:  188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_FRATF (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 60/172 (34.88%), Postives = 84/172 (48.84%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFE+ +P+ +      ++LE      +  GLGARD+LRLEAG+ LYG DM+   TP+E GL W++         F+G +  L +  +G   + VG            +  D      G ITSG FSP LK  I + YV     K      + +RGK  +  + K  FV
Sbjct:  188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_CORJK (Aminomethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=gcvT PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 61/179 (34.08%), Postives = 96/179 (53.63%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA-GGPPARSHSKVHDEQG-NPIGEITSGGFSPCLKKNIAMGY-----VKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFE+ V ++ A  +    ++++     L  GL  RD+LRLEAG+ LYGN++   +TPV+AGL   I    +++  F+G + I+   ++G     +G    G   AR   +V    G   IG +TSG  SP L   +A+ Y     V SG    G  V++++RGK ++  +  +PF
Sbjct:  208 TGEDGFELIVANDGAETVWTKAMDQAAQLGGLPCGLACRDTLRLEAGMPLYGNELSLKLTPVDAGL--GILAATKSKDSFVGRDAIVSAKEKGTQQVLIGLAGEGRRAARGGYEVFAGDGEKAIGAVTSGALSPTLGHPVALAYVAKSAVSSGAAAEGATVEVDIRGKRFEYKVVALPF 384          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_STRCO (Aminomethyltransferase OS=Streptomyces coelicolor GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEG---PPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTK-VKIEVRGKAYDGNITKMPF 515
            TGEDGFE+ V  E AV L + +    E    +  GL  RD+LRLEAG+ LYGN++   +TP +AGL   +  +   EG F+G   + +  +     PP   VG  A G             G  IGE+TSG  SP L + IAM YV       GT+ V +++RG      +  +PF
Sbjct:  194 TGEDGFELFVKPEHAVGLWQALTGAGEAAGLIPCGLSCRDTLRLEAGMPLYGNELSTALTPFDAGLGRVV--KFEKEGDFVGRAALTEAAERAASRPPRVLVGLVAEGRRVPRSGYRVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDPAHAAPGTEGVGVDIRGSHEPYEVVALPF 367          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SHIFL (Aminomethyltransferase OS=Shigella flexneri GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+E+A D  + ++E     V+  GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I      +  F+G E +  Q + G        +   G      P R      D QGN   G ITSG FSP L  +IA+  V  G+   G    +++R +     +TK  FV
Sbjct:  190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPTDRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SHIF8 (Aminomethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+E+A D  + ++E     V+  GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I      +  F+G E +  Q + G        +   G      P R      D QGN   G ITSG FSP L  +IA+  V  G+   G    +++R +     +TK  FV
Sbjct:  190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPTDRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_ENTS8 (Aminomethyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+E+A      ++E     V+  GLGARD+LRLEAG+ LYG +M++ V+P+ A + W I  +   +  F+G + +  Q + G        +   G   G  P R      D+QGN   G ITSG FSP L  +IA+  V +G+   G    +++R +     +TK  FV
Sbjct:  190 TGEAGYEIAMPNEKAAGFWSQLVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWQPE-DRAFIGRDALEAQRENGTEQLVGLVMTEKGVLRGELPVR----FTDDQGNAREGIITSGTFSPTLGYSIALARVPAGI---GDTAIVQIRNREMPVKVTKPIFV 357          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_ENT38 (Aminomethyltransferase OS=Enterobacter sp. (strain 638) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+E+A +    ++E     V+  GLGARD+LRLEAG+ LY  +M++ V+P+ A + W I     A+  F+G E +  Q ++G        +   G      P R      DE GN   G ITSG FSP L  +IA+  V +G+   G    +++R +    N+TK  FV
Sbjct:  190 TGEAGYEIAMPNEKAAEFWHALVEAG---VKPAGLGARDTLRLEAGMNLYSQEMDETVSPLAANMGWTIA-WEPADREFIGREALEMQREKGTDQLVGLVMTEKGVLRNELPVR----FTDELGNQREGMITSGTFSPTLGYSIALARVPAGI---GETAIVQIRNREMPVNVTKPIFV 357          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_IDILO (Aminomethyltransferase OS=Idiomarina loihiensis GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-SKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI VP+E+   L   +L+     V   GLGARD+LRLEAG+ LYG DM++++TP+EA + W++     A+  F+G + + ++  EG   + VG          H  KV  E G   G ITSG FSP L  ++AM  V S +   G   ++E+R K     + K  FV
Sbjct:  190 TGEKGYEIVVPAEQLEALWNDLLKAD---VAPCGLGARDTLRLEAGMNLYGQDMDENITPLEANMGWSVA-FEPADRDFIGRKALEQKKAEGHD-KLVGLVMEEKGVLRHGQKVTVEGGE--GIITSGTFSPTLGFSVAMARVPSSV---GDTAEVEMRKKQMPVKVVKPGFV 352          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_FRATN (Aminomethyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=gcvT PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 60/172 (34.88%), Postives = 84/172 (48.84%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFE+ +P+ +      ++LE      +  GLGARD+LRLEAG+ LYG DM+   TP+E GL W++         F+G +  L +  +G   + VG            +  D      G ITSG FSP LK  I + YV     K      + +RGK  +  + K  FV
Sbjct:  188 TGEDGFEVILPTTQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDISTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351          
The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
GCST_FRATH3.272e-1834.88Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_FRATF3.272e-1834.88Aminomethyltransferase OS=Francisella tularensis s... [more]
GCST_CORJK3.272e-1834.08Aminomethyltransferase OS=Corynebacterium jeikeium... [more]
GCST_STRCO4.274e-1836.36Aminomethyltransferase OS=Streptomyces coelicolor ... [more]
GCST_SHIFL4.274e-1835.20Aminomethyltransferase OS=Shigella flexneri GN=gcv... [more]
GCST_SHIF84.274e-1835.20Aminomethyltransferase OS=Shigella flexneri seroty... [more]
GCST_ENTS84.274e-1835.20Aminomethyltransferase OS=Enterobacter sakazakii (... [more]
GCST_ENT384.274e-1835.75Aminomethyltransferase OS=Enterobacter sp. (strain... [more]
GCST_IDILO5.582e-1838.15Aminomethyltransferase OS=Idiomarina loihiensis GN... [more]
GCST_FRATN5.582e-1834.88Aminomethyltransferase OS=Francisella tularensis s... [more]

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Properties
Property NameValue
Genbank description3g1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003g1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bp
ACACTGGTGAAGATGGATTTGAAATCTCTGTTCCATCTGAGCGTGCAGTG
GATCTTGCCAAAACAATTCTGGAGAAATCTGAAGGAAAGGTGAGGTTGAC
AGGTCTCGGTGCTCGAGACAGTCTCCGACTTGAAGCTGGCTTATGTTTAT
ATGGTAATGACATGGAACAACACGTGACACCTGTAGAAGCTGGACTGACA
TGGGCCATAGGAAAGAGGAGGAGAGCAGAAGGTGGCTTTCTAGGTGCTGA
GAAAATACTCAAACAACTTGACGAAGGTCCGCCAGTCAGACGTGTTGGAT
TCTTCGCTGGAGGTCCGCCTGCCAGATCACACAGTAAGGTTCACGATGAG
CAAGGGAATCCCATTGGAGAAATTACCAGTGGAGGATTCAGCCCCTGCCT
CAAGAAGAATATAGCCATGGGATATGTAAAATCTGGATTGCACAAGGCAG
GCACAAAAGTTAAGATTGAGGTTCGAGGAAAAGCCTACGATGGAAACATC
ACTAAAATGCCATTTGTGCCAACAAAATACTACAAGCCGTCTTAG
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