EG358356

Overview
NameEG358356
Unique NameEG358356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SERP5 (Aminomethyltransferase OS=Serratia proteamaculans (strain 568) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17
Identity = 64/179 (35.75%), Postives = 94/179 (52.51%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P E+ VD  + +L      V+  GLGARD+LRLEAG+ LYG +M++ V+P+ A + W I      +  F+G E + KQ + G        +   G      P R      DE G    G ITSG FSP L  +IA+  V +G+   G +  +++R +     +TK  FV
Sbjct:  190 TGEAGYEIALPKEQVVDFWQKLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWLPE-DRQFIGREALEKQREMGTEQLVGLIMTEKGVLRNELPVR----FTDEAGQTHEGIITSGSFSPTLGFSIALARVPAGI---GEQAIVQIRNREMPVKVTKPGFV 357          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PECCP (Aminomethyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17
Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+E+ VD  + +L      V+  GLGARD+LRLEAG+ LYG DM++ ++P+ A + W I  +   +  F+G E +  Q ++G        +   G      P R      D  G    G ITSG FSP L  +IA+  V  G+   G +  +++R +    ++TK  FV
Sbjct:  195 TGEAGYEIALPNEQVVDFWQQLLAAG---VKPCGLGARDTLRLEAGMNLYGQDMDEGISPLAANMGWTIAWQPE-DRQFIGREALTHQREKGTDQLVGLVLTEKGVLRNDLPVR----FTDSDGVMREGVITSGSFSPTLGVSIALARVPLGI---GEQAIVQIRNRELPVHVTKPGFV 362          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_HALHL (Aminomethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17
Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA-GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFE+ +P+++A  L   +   +E   +  GLGARDSLRLEAGL L G++M++  TP+EA L W +      +  F+G   + +Q   G   R +G    G  PAR    V  + G+  G ITSG  SP L   IA+  V +G   A    ++ +R +       K PFV
Sbjct:  190 TGEDGFELILPADQAPALWDRL---TEAGAQPCGLGARDSLRLEAGLNLNGHEMDEETTPLEAALGWTVAWDPE-DRDFIGRAALEEQRRHGAAWRLIGLLVEGRAPAREGYVVRTDAGD--GVITSGAHSPTLGGPIALARVPAG---AEGDWRVVIRKREAAARRVKPPFV 353          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_TERTT (Aminomethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17
Identity = 61/173 (35.26%), Postives = 90/173 (52.02%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDG+EI +P+E AV L + +       V   GLGARD+LRLEAG+ LYG++M+   +P+ A + W +     AE  F+G E +  +   G   + VG  + G    R+  +V     + +G ITSG FSP L  +IA+  V  G      +  + VR +  +  I    FV
Sbjct:  191 TGEDGYEIILPAEAAVQLWQDLARIG---VTPCGLGARDTLRLEAGMNLYGHEMDDDTSPLVANMAWTVA-WEPAERNFIGREALTAEKSAGISHKLVGLVYTGKGVLRAEQEVTAPGVDGVGVITSGTFSPTLGYSIALARVPVGF---TDQAVVNVRNRQLEVKIISPCFV 356          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SODGM (Aminomethyltransferase OS=Sodalis glossinidius (strain morsitans) GN=gcvT PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17
Identity = 64/176 (36.36%), Postives = 94/176 (53.41%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVH--DEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G+EI++P+ +A D  + +L      V+  GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I  R      F+G E +  Q   G   + VG         R+   VH  D  GN   G ITSG FSP L  +IA+  V +G+   G +  + +R +     +TK  FV
Sbjct:  190 TGEAGYEIALPATQAADFWRQLLAAG---VKPCGLGARDTLRLEAGMNLYGQEMDEGISPLAANMGWTITWRPEGR-DFIGREALEAQRAAGDGEQLVGLVMTEKGVLRNGLPVHFTDAAGNMQQGIITSGSFSPTLGVSIALARVPAGI---GQQAIVLIRNREMPVKVTKPGFV 358          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SACEN (Aminomethyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=gcvT PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17
Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFE+      A  + + + +  +E  +R  GL  RD+LRLEAG+ LYGN++   +TP  A L   +  +    G F+G   +    ++    + VG       A  H  +V D  G  IG +TSG  SP L   IAM YV     + GT +++++RG A    +  +PF
Sbjct:  192 TGEDGFELFTSPADAPAVWQALADSGAEHGLRPAGLSCRDTLRLEAGMPLYGNELSAELTPFHANLGRVV--KLDKPGDFVGKAPLAAAAEKPTERKLVGLRTDQRRAPRHGYRVLDAGGAEIGVVTSGAPSPTLGHPIAMAYVDRDHAEPGTALQVDIRGTAVPVEVVALPF 362          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_STRAW (Aminomethyltransferase OS=Streptomyces avermitilis GN=gcvT PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 62/176 (35.23%), Postives = 89/176 (50.57%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQ---LDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTK-VKIEVRGKAYDGNITKMPF 515
            TGEDGFE+ V    A  L + + E  +   +   GL  RD+LRLEAG+ LYG+++   +TP +AGL   +  +   EG F+G E + +     ++ PP   VG  A G             G  IGE+TSG  SP L + IAM YV +     GT  V +++RG      +  +PF
Sbjct:  194 TGEDGFELFVDPADAEKLWQALTEAGAPAGLVPCGLSCRDTLRLEAGMPLYGHELSTSLTPFDAGLGRVV--KFEKEGDFVGREALTEAAALAEKNPPRVLVGLIAEGRRVPRAGYPVVVGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHAAPGTAGVGVDIRGSHEPYEVVALPF 367          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_EXIS2 (Aminomethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gcvT PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFE+ +PS  A  +   +LE     V   GLGARD+LR EA L LYG+++   ++P+EAG+ +A+  + ++   F+G+E ++KQ ++GP  + +G                  G  IG +T+G   P + K IA+  V +      T  +IEVRGK         PF
Sbjct:  192 TGEDGFELYMPSADASAVWNALLEAD---VVPCGLGARDTLRFEACLPLYGHELSATISPIEAGMGFAVKPQVKS---FVGSEVLVKQKEDGPRRQLIGLELTDKGIARQDAPVLVNGETIGFVTTGTLPPTIGKAIALALVPTEYATEET-FEIEVRGKKLAAKRIDTPF 355          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_MYCLE (Aminomethyltransferase OS=Mycobacterium leprae GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = 3
Query:    3 TGEDGFEISVPSERA-VDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKS-GLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 527
            TGE G+E+  P E A V     +    + +    GLGARD+LR E G  LYG+++   ++P++A   WAIG ++ A   FLG + +L +   GP     G    G               PIG  TSG FSP L+  +A+  + S    + G ++ ++VRG+A +  + + PF+  K
Sbjct:  192 TGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLRTEMGYPLYGHELSLDISPLQARCGWAIGWKKDA---FLGRDALLAEKAAGPRRLLRGLRMAGRGVLRPGLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDSEAAVQDGQQIIVDVRGRAVECEVVRPPFIEVK 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_MYCLB (Aminomethyltransferase OS=Mycobacterium leprae (strain Br4923) GN=gcvT PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16
Identity = 57/177 (32.20%), Postives = 89/177 (50.28%), Query Frame = 3
Query:    3 TGEDGFEISVPSERA-VDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKS-GLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 527
            TGE G+E+  P E A V     +    + +    GLGARD+LR E G  LYG+++   ++P++A   WAIG ++ A   FLG + +L +   GP     G    G               PIG  TSG FSP L+  +A+  + S    + G ++ ++VRG+A +  + + PF+  K
Sbjct:  192 TGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLRTEMGYPLYGHELSLDISPLQARCGWAIGWKKDA---FLGRDALLAEKAAGPRRLLRGLRMAGRGVLRPGLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDSEAAVQDGQQIIVDVRGRAVECEVVRPPFIEVK 365          
The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
GCST_SERP51.624e-1735.75Aminomethyltransferase OS=Serratia proteamaculans ... [more]
GCST_PECCP2.121e-1734.64Aminomethyltransferase OS=Pectobacterium carotovor... [more]
GCST_HALHL2.121e-1736.99Aminomethyltransferase OS=Halorhodospira halophila... [more]
GCST_TERTT2.770e-1735.26Aminomethyltransferase OS=Teredinibacter turnerae ... [more]
GCST_SODGM2.770e-1736.36Aminomethyltransferase OS=Sodalis glossinidius (st... [more]
GCST_SACEN8.060e-1733.53Aminomethyltransferase OS=Saccharopolyspora erythr... [more]
GCST_STRAW1.053e-1635.23Aminomethyltransferase OS=Streptomyces avermitilis... [more]
GCST_EXIS21.053e-1634.50Aminomethyltransferase OS=Exiguobacterium sibiricu... [more]
GCST_MYCLE1.375e-1632.20Aminomethyltransferase OS=Mycobacterium leprae GN=... [more]
GCST_MYCLB1.375e-1632.20Aminomethyltransferase OS=Mycobacterium leprae (st... [more]

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Properties
Property NameValue
Genbank description3g1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003g1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bp
ACACTGGTGAAGATGGATTTGAAATCTCTGTTCCATCTGAGCGTGCAGTG
GATCTTGCCAAAACAATTCTGGAGAAATCTGAAGGAAAGGTGAGGTTGAC
AGGTCTCGGTGCTCGAGACAGTCTCCGACTTGAAGCTGGCTTATGTTTAT
ATGGTAATGACATGGAACAACACGTGACACCTGTAGAAGCTGGACTGACA
TGGGCCATAGGAAAGAGGAGGAGAGCAGAAGGTGGCTTTCTAGGTGCTGA
GAAAATACTCAAACAACTTGACGAAGGTCCGCCAGTCAGACGTGTTGGAT
TCTTCGCTGGAGGTCCGCCTGCCAGATCACACAGTAAGGTTCACGATGAG
CAAGGGAATCCCATTGGAGAAATTACCAGTGGAGGATTCAGCCCCTGCCT
CAAGAAGAATATAGCCATGGGATATGTAAAATCTGGATTGCACAAGGCAG
GCACAAAAGTTAAGATTGAGGTTCGAGGAAAAGCCTACGATGGAAACATC
ACTAAAATGCCATTTGTGCCAACAAAATACTACAAGCCGTCTTAG
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