EG358356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_DESHD (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEK--SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536 TGEDGFEI +P E A + + ILE SEG V+ GLGARD+LR EA L LYGN++ +TP+EAGL + + + + F+G E + Q ++G P + VG ARSH + E G IG ITSG FSP L KNIA+G + + G + + +RGKA K +P+ +YK Sbjct: 192 TGEDGFEIYLPPEHAPRMWERILEVGGSEG-VQPIGLGARDTLRFEARLPLYGNELGPDITPLEAGLGFFV---KLEKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKE-GKEIGFITSGSFSPTLNKNIALGLIPPEYAQIGETLDVIIRGKA-----VKARIIPSLFYK 362
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.714e-25 Identity = 66/171 (38.60%), Postives = 92/171 (53.80%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515 TGEDG E+ + +E L +LEK V GLGARD+LRLEA + LYG DM P EAGL W + A+ F+G + + + + GP R VG G H G P+G +TSG +SP L++ IA+ + + L K GT + +E+RGKA + + PF Sbjct: 196 TGEDGAELLLTAEDGQLLWSQLLEKG---VAPCGLGARDTLRLEAAMHLYGQDMNADTNPFEAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PARD8 (Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25 Identity = 72/175 (41.14%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515 TG GFE+ + + I E K EG ++ GLGARD+LRLE G CLYGND++ +P+EAGL W + AEG F ++ +Q EG + F H ++ D +GN IG +TSG SP LKK I MGYVK KAGT + I+VR K + K PF Sbjct: 189 TGAGGFELYFYPSDGMTIWNAIFEAGKPEG-IKPIGLGARDTLRLEMGFCLYGNDLDDTTSPIEAGLGWIT---KFAEGKNFTNRAELERQKKEGVTRKLCAFELQEKGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQVVKAPF 359
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_GEOSW (Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25 Identity = 71/173 (41.04%), Postives = 99/173 (57.23%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515 TGEDGFEI E AV L ++ILE K EG V GLGARD+LR EA L LYG ++ + +TP+EAGL +A+ + A+ F+G + + KQ +EG + VG H G IG +T+G SP LKKNI + +K+ + T+V++E+RGK + PF Sbjct: 190 TGEDGFEIYCRREDAVALWESILEAGKEEG-VLPCGLGARDTLRFEATLPLYGQELSKDITPIEAGLGFAVKTNKDAD--FIGKDVLKKQKEEGTARKLVGIEMIDKGIPRHGYKVFANGEEIGFVTTGTQSPTLKKNIGLALIKTEFTEMDTEVEVEIRGKRLKAKVIATPF 359
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25 Identity = 72/172 (41.86%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518 TGEDG EI +P+ A+ L + +LE + GLGARD+LRLEAGL LYGNDM++ +TP EA + W + R F+G + +L Q + G + G R+H KV G GEITSG FSP L K+IA+ + +G A KV +E+R K + K PFV Sbjct: 188 TGEDGVEIMLPNADALTLWEQLLEAGVSPI---GLGARDTLRLEAGLNLYGNDMDESITPWEANMGWTVMLNDRE---FIGRQPLLNQKENGHSEQVGLILEGKGVLRAHQKVLMPNGEE-GEITSGTFSPTLGKSIALARLPAG---ATGKVDVEIRNKRQVAQVVKPPFV 349
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24 Identity = 72/177 (40.68%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 521 TGEDGFEI + L +LE + L GLGARD+LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLLPCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24 Identity = 72/177 (40.68%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 521 TGEDGFEI + L +LE + L GLGARD+LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLLPCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515 TG GFE+ + A + + E K EG ++ GLGARD+LRLE G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 189 TGAGGFELYFYPQYAQKIWDALFEAGKPEG-IKPAGLGARDTLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515 TG GFE+ + A + + E K EG ++ GLGARD+LRLE G CLYGND+ +P+EAGL W + + + + KI+++ G R++ F G P R H ++ + +G IGE+TSG SPCLKK I MGYV + K GT++ I VRG+ I K PF Sbjct: 189 TGAGGFELYFYPQYAQKIWDALFEAGKPEG-IKPAGLGARDTLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_NEIMB (Aminomethyltransferase OS=Neisseria meningitidis serogroup B GN=gcvT PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24 Identity = 68/173 (39.31%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG-FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518 TGEDG E+ +P AV K + + V+ GLGARD+LR+EAG+ LYGNDM+ +P+EAG+ W + + + F+G +L ++G V++VG G R+H +V ++G GE TSG FSP LK++IA+ V G K+ +RGK D + K+PFV Sbjct: 194 TGEDGVEVILPGTEAVAFFKAL---QQAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGQ--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLMRGKEVDVRVLKLPFV 358 The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bpback to top |