EG358356

Overview
NameEG358356
Unique NameEG358356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_DESHD (Aminomethyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK--SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536
            TGEDGFEI +P E A  + + ILE   SEG V+  GLGARD+LR EA L LYGN++   +TP+EAGL + +   +  +  F+G E +  Q ++G P + VG        ARSH  +  E G  IG ITSG FSP L KNIA+G +     + G  + + +RGKA      K   +P+ +YK
Sbjct:  192 TGEDGFEIYLPPEHAPRMWERILEVGGSEG-VQPIGLGARDTLRFEARLPLYGNELGPDITPLEAGLGFFV---KLEKDNFIGKEALSAQKEKGVPRKLVGLEMIERGIARSHYPLQKE-GKEIGFITSGSFSPTLNKNIALGLIPPEYAQIGETLDVIIRGKA-----VKARIIPSLFYK 362          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.714e-25
Identity = 66/171 (38.60%), Postives = 92/171 (53.80%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDG E+ + +E    L   +LEK    V   GLGARD+LRLEA + LYG DM     P EAGL W +     A+  F+G + + +  + GP  R VG    G     H       G P+G +TSG +SP L++ IA+  + + L K GT + +E+RGKA    + + PF
Sbjct:  196 TGEDGAELLLTAEDGQLLWSQLLEKG---VAPCGLGARDTLRLEAAMHLYGQDMNADTNPFEAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PARD8 (Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 72/175 (41.14%), Postives = 94/175 (53.71%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TG  GFE+       + +   I E  K EG ++  GLGARD+LRLE G CLYGND++   +P+EAGL W     + AEG  F    ++ +Q  EG   +   F         H  ++ D +GN IG +TSG  SP LKK I MGYVK    KAGT + I+VR K     + K PF
Sbjct:  189 TGAGGFELYFYPSDGMTIWNAIFEAGKPEG-IKPIGLGARDTLRLEMGFCLYGNDLDDTTSPIEAGLGWIT---KFAEGKNFTNRAELERQKKEGVTRKLCAFELQEKGIPRHGYEIADAEGNVIGVVTSGTMSPVLKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQVVKAPF 359          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_GEOSW (Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.157e-25
Identity = 71/173 (41.04%), Postives = 99/173 (57.23%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDGFEI    E AV L ++ILE  K EG V   GLGARD+LR EA L LYG ++ + +TP+EAGL +A+   + A+  F+G + + KQ +EG   + VG          H       G  IG +T+G  SP LKKNI +  +K+   +  T+V++E+RGK     +   PF
Sbjct:  190 TGEDGFEIYCRREDAVALWESILEAGKEEG-VLPCGLGARDTLRFEATLPLYGQELSKDITPIEAGLGFAVKTNKDAD--FIGKDVLKKQKEEGTARKLVGIEMIDKGIPRHGYKVFANGEEIGFVTTGTQSPTLKKNIGLALIKTEFTEMDTEVEVEIRGKRLKAKVIATPF 359          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.041e-25
Identity = 72/172 (41.86%), Postives = 97/172 (56.40%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDG EI +P+  A+ L + +LE     +   GLGARD+LRLEAGL LYGNDM++ +TP EA + W +    R    F+G + +L Q + G   +      G    R+H KV    G   GEITSG FSP L K+IA+  + +G   A  KV +E+R K     + K PFV
Sbjct:  188 TGEDGVEIMLPNADALTLWEQLLEAGVSPI---GLGARDTLRLEAGLNLYGNDMDESITPWEANMGWTVMLNDRE---FIGRQPLLNQKENGHSEQVGLILEGKGVLRAHQKVLMPNGEE-GEITSGTFSPTLGKSIALARLPAG---ATGKVDVEIRNKRQVAQVVKPPFV 349          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24
Identity = 72/177 (40.68%), Postives = 100/177 (56.50%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 521
            TGEDGFEI       + L   +LE  +    L  GLGARD+LR+EA   LYG+++    TP+E+G+ W + ++   E  +  +EKIL Q   G P + V F    AG P  R + +V D QGN IG+ TSG FSP LKK I +  ++S   K G  ++IE+R +     IT  PF+P
Sbjct:  194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLLPCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.050e-24
Identity = 72/177 (40.68%), Postives = 100/177 (56.50%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 521
            TGEDGFEI       + L   +LE  +    L  GLGARD+LR+EA   LYG+++    TP+E+G+ W + ++   E  +  +EKIL Q   G P + V F    AG P  R + +V D QGN IG+ TSG FSP LKK I +  ++S   K G  ++IE+R +     IT  PF+P
Sbjct:  194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLLPCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TG  GFE+    + A  +   + E  K EG ++  GLGARD+LRLE G CLYGND+    +P+EAGL W    +   +   + + KI+++   G   R++  F     G P R H ++ + +G  IGE+TSG  SPCLKK I MGYV +   K GT++ I VRG+     I K PF
Sbjct:  189 TGAGGFELYFYPQYAQKIWDALFEAGKPEG-IKPAGLGARDTLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA---GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TG  GFE+    + A  +   + E  K EG ++  GLGARD+LRLE G CLYGND+    +P+EAGL W    +   +   + + KI+++   G   R++  F     G P R H ++ + +G  IGE+TSG  SPCLKK I MGYV +   K GT++ I VRG+     I K PF
Sbjct:  189 TGAGGFELYFYPQYAQKIWDALFEAGKPEG-IKPAGLGARDTLRLEMGFCLYGNDICDTTSPIEAGLGWIT--KFTDDKMDMPSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGIGMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPF 360          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_NEIMB (Aminomethyltransferase OS=Neisseria meningitidis serogroup B GN=gcvT PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.791e-24
Identity = 68/173 (39.31%), Postives = 100/173 (57.80%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG-FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDG E+ +P   AV   K +    +  V+  GLGARD+LR+EAG+ LYGNDM+   +P+EAG+ W +  +  +   F+G   +L   ++G  V++VG     G   R+H +V  ++G   GE TSG FSP LK++IA+  V       G   K+ +RGK  D  + K+PFV
Sbjct:  194 TGEDGVEVILPGTEAVAFFKAL---QQAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGQ--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLMRGKEVDVRVLKLPFV 358          
The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
GCST_DESHD3.610e-2542.54Aminomethyltransferase OS=Desulfitobacterium hafni... [more]
GCST_SYNS94.714e-2538.60Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_PARD86.157e-2541.14Aminomethyltransferase OS=Parabacteroides distason... [more]
GCST_GEOSW6.157e-2541.04Aminomethyltransferase OS=Geobacillus sp. (strain ... [more]
GCST_ALCBS8.041e-2541.86Aminomethyltransferase OS=Alcanivorax borkumensis ... [more]
GCST_LEPIN1.050e-2440.68Aminomethyltransferase OS=Leptospira interrogans G... [more]
GCST_LEPIC1.050e-2440.68Aminomethyltransferase OS=Leptospira interrogans s... [more]
GCST_PORGI1.791e-2440.34Aminomethyltransferase OS=Porphyromonas gingivalis... [more]
GCST_PORG31.791e-2440.34Aminomethyltransferase OS=Porphyromonas gingivalis... [more]
GCST_NEIMB1.791e-2439.31Aminomethyltransferase OS=Neisseria meningitidis s... [more]

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Properties
Property NameValue
Genbank description3g1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003g1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bp
ACACTGGTGAAGATGGATTTGAAATCTCTGTTCCATCTGAGCGTGCAGTG
GATCTTGCCAAAACAATTCTGGAGAAATCTGAAGGAAAGGTGAGGTTGAC
AGGTCTCGGTGCTCGAGACAGTCTCCGACTTGAAGCTGGCTTATGTTTAT
ATGGTAATGACATGGAACAACACGTGACACCTGTAGAAGCTGGACTGACA
TGGGCCATAGGAAAGAGGAGGAGAGCAGAAGGTGGCTTTCTAGGTGCTGA
GAAAATACTCAAACAACTTGACGAAGGTCCGCCAGTCAGACGTGTTGGAT
TCTTCGCTGGAGGTCCGCCTGCCAGATCACACAGTAAGGTTCACGATGAG
CAAGGGAATCCCATTGGAGAAATTACCAGTGGAGGATTCAGCCCCTGCCT
CAAGAAGAATATAGCCATGGGATATGTAAAATCTGGATTGCACAAGGCAG
GCACAAAAGTTAAGATTGAGGTTCGAGGAAAAGCCTACGATGGAAACATC
ACTAAAATGCCATTTGTGCCAACAAAATACTACAAGCCGTCTTAG
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