EG358356

Overview
NameEG358356
Unique NameEG358356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_SYNS3 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9311) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.981e-23
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDG E+ + ++    L + +LE+    V   GLGARD+LRLEA + LYG DM+   TP EAGL W +     A   F+G + + +  ++GP  R VG    G     H       G  +G +TSG +SP L++ IA+  +   L K GT++ +E+RG+     + K PF
Sbjct:  200 TGEDGVELLLKADDGRQLWQLLLEEG---VTPCGLGARDTLRLEAAMHLYGQDMDAATTPFEAGLGWLVHLEMPAL--FIGRQALEQAAEQGPSKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTELSVEIRGQLQPATVVKRPF 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_OCEIH (Aminomethyltransferase OS=Oceanobacillus iheyensis GN=gcvT PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.981e-23
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGK-VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG--FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 536
            TGEDGFEI + +   V L K +LEK E   +   GLGARD+LR EA L LYG ++ + ++P+EAGL +A+   +  +  F+G E +  Q++ G   + VG      G P   +  + D +   IG ITSG  SP L KN+ +  +     + GT+V ++VR +     I K   VPT +YK
Sbjct:  197 TGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIGLGARDTLRFEANLALYGQELSKDISPIEAGLGFAVKVNKGPD--FIGKEVLKNQVENGTDRKLVGIEMIDKGIPRHEYEVLKDNK--EIGFITSGTQSPTLNKNVGLALINISYTEIGTEVDVKVRKR-----ILKAKIVPTPFYK 368          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_LEGPL (Aminomethyltransferase OS=Legionella pneumophila (strain Lens) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.981e-23
Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDG EI VP+E    L   +L      V   GLGARD+LRLEAG+ LYG DM++  TP+E+GLTW + K    + GF+G   ++ Q  +G   + VG          H +    +G P G ITSG +SP L+++IA+  V     + G +V +++RGK     + K  F+
Sbjct:  190 TGEDGLEIIVPNEFVTQLWNDLLNAG---VTPCGLGARDTLRLEAGMLLYGQDMDETTTPLESGLTWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_RALPJ (Aminomethyltransferase OS=Ralstonia pickettii (strain 12J) GN=gcvT PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.587e-23
Identity = 69/174 (39.66%), Postives = 100/174 (57.47%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFE+ VP+ +   + + +L+     VR  GLGARD+LRLEAG+ LYG DM++HV+P++AGL W +    ++E  F G   +      G   + VG      G   R+H KV    G+  GEITSG FSP L  +IA+  +   +   GT V++E+R +     + K+PFV
Sbjct:  205 TGEDGFELVVPAAQIAGVWERLLQAG---VRPAGLGARDTLRLEAGMNLYGQDMDEHVSPLDAGLAWTVD--LQSERDFTGKAALQA---GGQREQFVGLILRDKGGVLRAHQKVITAAGD--GEITSGTFSPSLSLSIALARLPKEV-PVGTDVQVEIRDRKLTATVVKLPFV 367          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_PROMA (Aminomethyltransferase OS=Prochlorococcus marinus GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23
Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 515
            TGEDG+EI + +     L + ++E     V   GLGARD+LRLEAG+ LYGND+    TP EAGL W +      E  F+G   ++KQ +EG   + V     G            +   +GEITSG +SP L + IA+ Y+   L K GT V +++R K +   + K PF
Sbjct:  203 TGEDGYEILLNTNAGKSLWRELIENG---VTPCGLGARDTLRLEAGMPLYGNDINNTTTPFEAGLGWLVHLETPDE--FIGKAALVKQTNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPIDLTKIGTAVSVQIRDKLHTAIVAKKPF 368          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_CHLTE (Aminomethyltransferase OS=Chlorobium tepidum GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23
Identity = 67/175 (38.29%), Postives = 102/175 (58.29%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILE--KSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGE G EI +P+ERAV L   ++E  KS+G ++  GLGARD+LRLE G  LYG+++E+ V P+EA L W +   +  +  F+G ++  +Q++  P    VGF   G    R H KV++     IGE+ SG  SP L++ I    +     + GT + +E+RG    G + ++PFV
Sbjct:  191 TGEAGVEICLPNERAVALWSALMEAGKSDG-IQPIGLGARDTLRLEMGYSLYGHEIERDVNPLEARLKWVV---KLNKPNFIG-KQACEQVEINPRKSVVGFSLEGRAIPRQHFKVYNSDKQEIGEVCSGTVSPTLQEPIGTASLLLDYAQPGTPIFVEIRGTMQPGAVRRLPFV 360          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23
Identity = 73/176 (41.48%), Postives = 102/176 (57.95%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 518
            TGEDGFEI VP+     L   +  +++G VR  GLGARD+LRLEAG+ LYG DM+  V+P++AGL W +      E  F+G  K+     KQ   G  + +    A G   R+H KV    G   GEITSG FSP ++++IA   V  G+ + G  V +++R KA   ++ K+PFV
Sbjct:  198 TGEDGFEIIVPAAHVEALWNAL--QAQG-VRPAGLGARDTLRLEAGMNLYGQDMDDDVSPLDAGLAWTVDLSAPRE--FIGRAKLEADGSKQSFVGLILHKDNGKAAG-VLRAHQKVVTPNGE--GEITSGTFSPTMQESIAFARVPKGV-QPGDVVHVQIRDKALPASVVKLPFV 364          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_BACHK (Aminomethyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.412e-23
Identity = 73/183 (39.89%), Postives = 103/183 (56.28%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 542
            TGEDGFEI   SE A  L + +LE  +E  ++  GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_BACCR (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.412e-23
Identity = 73/183 (39.89%), Postives = 103/183 (56.28%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEK-SEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 542
            TGEDGFEI   SE A  L + +LE  +E  ++  GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G   + +Q + G P + VG      G P R+H  V   +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365          
BLAST of EG358356 vs. ExPASy Swiss-Prot
Match: GCST_BACCN (Aminomethyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gcvT PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.412e-23
Identity = 72/183 (39.34%), Postives = 104/183 (56.83%), Query Frame = 3
Query:    3 TGEDGFEISVPSERAVDLAKTILEKSE-GKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 542
            TGEDGFEI   SE A+ + + +LE  E   ++  GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+   + A+  F G E + +  + G P + VG      G P R+H  V+  +   IGE+TSG  SP LKK+I +  +        T+V+IE+R K       K   VPT +YK S
Sbjct:  192 TGEDGFEIYCKSEDAIKIWEKLLEVGEEDSLKPCGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKEVLKEYKENGAPRKLVGIEVIERGIP-RTHYPVYVGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAIDTEVEIEIRKKR-----VKAVVVPTPFYKRS 365          
The following BLAST results are available for this feature:
BLAST of EG358356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
GCST_SYNS31.981e-2336.84Aminomethyltransferase OS=Synechococcus sp. (strai... [more]
GCST_OCEIH1.981e-2337.57Aminomethyltransferase OS=Oceanobacillus iheyensis... [more]
GCST_LEGPL1.981e-2338.37Aminomethyltransferase OS=Legionella pneumophila (... [more]
GCST_RALPJ2.587e-2339.66Aminomethyltransferase OS=Ralstonia pickettii (str... [more]
GCST_PROMA3.378e-2338.01Aminomethyltransferase OS=Prochlorococcus marinus ... [more]
GCST_CHLTE3.378e-2338.29Aminomethyltransferase OS=Chlorobium tepidum GN=gc... [more]
GCST_BURP83.378e-2341.48Aminomethyltransferase OS=Burkholderia phymatum (s... [more]
GCST_BACHK4.412e-2339.89Aminomethyltransferase OS=Bacillus thuringiensis s... [more]
GCST_BACCR4.412e-2339.89Aminomethyltransferase OS=Bacillus cereus (strain ... [more]
GCST_BACCN4.412e-2339.34Aminomethyltransferase OS=Bacillus cereus subsp. c... [more]

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Properties
Property NameValue
Genbank description3g1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003g1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358356 ID=EG358356; Name=EG358356; organism=Citrus sinensis; type=EST; length=545bp
ACACTGGTGAAGATGGATTTGAAATCTCTGTTCCATCTGAGCGTGCAGTG
GATCTTGCCAAAACAATTCTGGAGAAATCTGAAGGAAAGGTGAGGTTGAC
AGGTCTCGGTGCTCGAGACAGTCTCCGACTTGAAGCTGGCTTATGTTTAT
ATGGTAATGACATGGAACAACACGTGACACCTGTAGAAGCTGGACTGACA
TGGGCCATAGGAAAGAGGAGGAGAGCAGAAGGTGGCTTTCTAGGTGCTGA
GAAAATACTCAAACAACTTGACGAAGGTCCGCCAGTCAGACGTGTTGGAT
TCTTCGCTGGAGGTCCGCCTGCCAGATCACACAGTAAGGTTCACGATGAG
CAAGGGAATCCCATTGGAGAAATTACCAGTGGAGGATTCAGCCCCTGCCT
CAAGAAGAATATAGCCATGGGATATGTAAAATCTGGATTGCACAAGGCAG
GCACAAAAGTTAAGATTGAGGTTCGAGGAAAAGCCTACGATGGAAACATC
ACTAAAATGCCATTTGTGCCAACAAAATACTACAAGCCGTCTTAG
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