CX672159

Overview
NameCX672159
Unique NameCX672159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.355e-40
Identity = 86/210 (40.95%), Postives = 124/210 (59.05%), Query Frame = -2
Query:  222 VTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCS-TDGNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIF-NRGC---GTQCSHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 833
            V+P+KNQG C  CW FS   A+E    I+SG ++ L+EQQ++DC+    N GC GG    AF+YI+ N+GI  E  YPY     +C     K  A + N  ++  NDE A+++AVA+  PVS   E +  DF  YK G++ ++ C     + +HAV  VG+G  ++G+ YW++KNSWG  WGE GY  I    E  + +CG+A   SYP+
Sbjct:  127 VSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLI----ERGKNMCGLAACASYPI 330          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.246e-40
Identity = 89/212 (41.98%), Postives = 121/212 (57.08%), Query Frame = -2
Query:  222 GAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCS-TDGNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 839
            G V+P+KNQG CG CW FS   A+E     ++G  I LSEQQ++DC     N GC GG    AF+YI  N G+ +E  YPY+ V G C+     V  K+ +  ++    E  L  AV + +PVS+  E     F+ YK G++    CGT     +HAV  VG+G  EDG+ YWLIKNSWG  WG+ GY +    +E  + +CG+AT  SYP+
Sbjct:  153 GIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYG-VEDGVPYWLIKNSWGADWGDEGYFK----MEMGKNMCGVATCASYPI 358          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.246e-40
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = -2
Query:  222 VTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTD-GNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 833
            V+P+KNQG CG CW FS   A+E    I++G ++ L+EQQ++DC+ +  N GC GG    AF+YI  N+GI  E  YPYK     C+    K  A + +  ++  NDE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  E+G+ YW++KNSWG  WG  GY  I    E  + +CG+A   SYP+
Sbjct:  129 VSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTN-DFLMYRKGIYS---STSCHKTPDKVNHAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLI----ERGKNMCGLAACASYPI 332          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.246e-40
Identity = 88/213 (41.31%), Postives = 125/213 (58.69%), Query Frame = -2
Query:  222 VTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTD-GNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 833
            VTP+KNQG CG CW FS   A+E    I++G L  L+EQQ++DC+ +  N GC GG    AF+YI  N+GI  E  YPY+   G C+    K  A + +  ++  NDE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  E G+ YW++KNSWG +WG  GY  I    E  + +CG+A   S+P+
Sbjct:  129 VTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTA-DFMMYRKGIYS---STSCHKTPDKVNHAVLAVGYG-EEKGIPYWIVKNSWGPNWGMKGYFLI----ERGKNMCGLAACASFPI 332          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 162.54 bits (410), Expect = 2.604e-39
Identity = 85/213 (39.91%), Postives = 125/213 (58.69%), Query Frame = -2
Query:  222 VTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTD-GNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 833
            V+P+KNQG CG CW FS   A+E    I++G ++ L+EQQ++DC+ D  N GC GG    AF+YI+ N+GI  E  YPY+   G C+    K    + +  ++   DE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  ++G+ YW++KNSWG  WG  GY  I    E  + +CG+A   SYP+
Sbjct:  129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVT-QDFMMYRTGIYS---STSCHKTPDKVNHAVLAVGYG-EKNGIPYWIVKNSWGPQWGMNGYFLI----ERGKNMCGLAACASYPI 332          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.441e-39
Identity = 87/212 (41.04%), Postives = 121/212 (57.08%), Query Frame = -2
Query:  225 KGAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCST-DGNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFKSYKGGIFNR-GCGTQCSHAVAIVGF---GATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYP 842
            +G VT ++ QG C  CWAF    A+EG     +G LIPLS Q ++DCS   GNRGC  G   NAF+Y++ N G+ +EA YPY+  +G C       +AKI+ F  V P  E  L+ AVA + P++  +      F+ Y+ G+++   C +  +HAV +VG+   G   DG  YWLIKNSWG+ WG  GYM+I +D       C IA+   YP
Sbjct:  134 EGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKD---RNNHCAIASLAQYP 341          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.800e-39
Identity = 89/212 (41.98%), Postives = 120/212 (56.60%), Query Frame = -2
Query:  222 GAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTD-GNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 839
            G V+P+KNQ  CG CW FS   A+E     ++G  I LSEQQ++DC+    N GC GG    AF+YI  N GI +E  YPYK V G C       A ++ +  ++  N E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    +E  + +C IAT  SYPV
Sbjct:  154 GIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVI-DGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYG-VENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCAIATCASYPV 359          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.893e-39
Identity = 84/219 (38.36%), Postives = 130/219 (59.36%), Query Frame = -2
Query:  225 KGAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTDGNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPND-------EQALLQAVAMQPVSICIEGSGPDFKSYKGGIFNRGCGTQC------SHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYP 842
            KG +T +K QG CG  WAFSA  A+E    I++G+L+ LSEQ+++DC  + + G   GW   +F++++++ GIA++ DYPY+  +G C+  +++    I  +E +  +D       EQA L A+  QP+S+ I+    DF  Y GGI++   G  C      +H V +VG+G+  DG+ YW+ KNSWG  WGE GY+ I R+     G+CG+    SYP
Sbjct:  144 KGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAK--DFHLYTGGIYD---GENCTSPYGINHFVLLVGYGSA-DGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYP 355          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.893e-39
Identity = 80/214 (37.38%), Postives = 129/214 (60.28%), Query Frame = -2
Query:  222 KGAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCS-TDGNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVA-AKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFKSYKGGIFNR-GCGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 842
            +  VTP+K+QG CG CW F +  ++EG   +++G L+ LSEQQ++DC+   G++GCGGG+  +AF+Y+++   +A+E++YPY    G C D  V  +   I+ + +V    E AL  A+A   PV+I I+ S  DF+ Y  G++N   C        H V  +G+G T  G  Y+L+KNSW  +WG  GY+ + R+      LCG++++ +YP+
Sbjct:  318 QNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYG-TYQGQDYFLVKNSWSTNWGMDGYVYMARN---DNNLCGVSSQATYPI 527          
BLAST of CX672159 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.204e-38
Identity = 86/212 (40.57%), Postives = 121/212 (57.08%), Query Frame = -2
Query:  222 GAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSTD-GNRGCGGGWMDNAFKYIIQNQGIASEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFKSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSYPV 839
            G V+P+K+QG CG CW FS   ++E     ++G  + LSEQQ++DC+T   N GC GG    AF+YI  N G+ +E  YPY  V G C      V  K+ +  ++    E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    +E  + +CGIAT  SYP+
Sbjct:  155 GIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVIN-GFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYG-VENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCGIATCASYPI 360          
The following BLAST results are available for this feature:
BLAST of CX672159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATH_MOUSE2.355e-4040.95Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP2_MAIZE5.246e-4041.98Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATH_PIG5.246e-4040.85Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_BOVIN5.246e-4041.31Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATH_HUMAN2.604e-3939.91Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATQ_RAT4.441e-3941.04Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ALEU_HORVU5.800e-3941.98Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
P34_SOYBN9.893e-3938.36P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CFAD_DICDI9.893e-3937.38Counting factor associated protein D OS=Dictyostel... [more]
ORYC_ORYSJ2.204e-3840.57Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15C12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15C12-F23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672159 ID=CX672159; Name=CX672159; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTATTTAAACGAGAGATTTAACATTAACTAATACCAAA
TATTGGCGTTCAATTACAACTTATGAAATACTCAACATAGGTAAAACCAC
AGAATCATATGATTCATACGGTTCGTATAAGCCTTTCGAGGCTAATGCAT
GTGTAGGCTTGAAGACATCATTATTAAGAGGCGGCTAATAATATTATAAT
ATAAAATACTGCTACTCATGCAACTGGGTAGGAAGGTTTAGTGGCAATGC
CACAGAGACCTTCAGGTGCTTCAACATCTCTGAGAATCCTCATGTAGCCG
GCCTCACCCCAGCTCTCCCCCCATGAATTCTTAATTAACCAATACTTCAT
TCCATCTTCAGTTGCCCCAAATCCAACGATAGCAACAGCATGAGAACACT
GAGTTCCACATCCTCGGTTAAAAATACCGCCTTTGTAACTCTTGAAGTCT
GGTCCACTTCCTTCAATGCAAATTGATACTGGCTGCATGGCTACAGCTTG
GAGTAAAGCCTGCTCATCATTGGGTTTTACATCTTCAAAGTTACTAATTT
TAGCAGCTACCTTGACCTGTGCGTCTTCACAAGTTCCTTGGACTTCCTTG
TATGGATAATCCGCTTCTGAGGCAATACCCTGGTTTTGTATAATATATTT
AAAGGCATTGTCCATCCAACCGCCACCGCATCCACGGTTACCATCTGTTG
AGCAGTCTAGTATTTGCTGCTCCGAAAGTGGAATAAGATTACCACTACTA
ATCTCAGTGACCCCTTCCACTGCCGCCACAGCTGAAAATGCCCAACAGTC
TCCACATTGACCTTGGTTCTTAATAGGAGTGACAGCTCCTTTC
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