CX672130

Overview
NameCX672130
Unique NameCX672130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D R+L +  R     Y  TY+ P+PV +LV ++A   Q  TQ    RP+GV LL+ G D    +LY + PSG YF ++A A+G  +   KT+LE+R+    E   +D +  A++ ++E  +G+    +I
Sbjct:   82 DYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLE--LDDAVHTAILTLKEGFEGKMTADNI 208          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15
Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  331 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQE 771
            D R +  + R +  N+ +TY+ P  +      + D A      +   +R   RP+GV LL+AG+DE G  LY++ PSG YF Y+A AIGS S+ AK+ L + F    + T E+     L  +R+ ++ E L S    +A V A   FHI + E
Sbjct:   84 DARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFH--KDMTLEEAEVLILKVLRQVME-EKLDSKNVQLAKVTAEGGFHIYNDE 233          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D RVL    R E   Y YTY  P+ V  LV  + D  QV TQ    RP+G  LL+AG+D KG  L+   PSG   E++A AIG   Q A    E  +    + T ++ I+ A+ A+ E  + ET   ++  +AVV   + F  L+++ ++++ +
Sbjct:   86 DARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYR--EDMTLQEAIELAVRALYEASREETTADNL-EIAVVDK-QGFRKLERKKIEEMFE 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15
Identity = 51/160 (31.87%), Postives = 83/160 (51.88%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWK-----RPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT-YLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D R+L  + R E  N+ +TY+ P+ V    +   D +    +   +     RP+GV LL+AG+DE G  L+   PSG Y  Y A AIG  ++AA+T + ER   N +    E+L    +  +R+ ++ +  K+S+    V  +     I DQE +Q++ID
Sbjct:   84 DARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENL---TVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIID 240          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 771
            D  +L    R     Y+ +Y+ P+PV +LV  L D  Q  TQ    RP+GV  L AG D+  G  LY + PSGNY  ++A A+G+ SQAA++ L++ + +    TRE+ +  AL  + +T+   +L +    +A V    G GE  + +   E + KL+
Sbjct:   82 DANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 771
            D  +L    R     Y+ +Y+ P+PV +LV  L D  Q  TQ    RP+GV  L AG D+  G  LY + PSGNY  ++A A+G+ SQAA++ L++ + +    TRE+ +  AL  + +T+   +L +    +A V    G GE  + +   E + KL+
Sbjct:   82 DANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 771
            D  +L    R     Y+ +Y+ P+PV +LV  L D  Q  TQ    RP+GV  L AG D+  G  LY + PSGNY  ++A A+G+ SQAA++ L++ + +    TRE+ +  AL  + +T+   +L +    +A V    G GE  + +   E + KL+
Sbjct:   82 DANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 771
            D  +L    R     Y+ +Y+ P+PV +LV  L D  Q  TQ    RP+GV  L AG D+  G  LY + PSGNY  ++A A+G+ SQAA++ L++ + +    TRE+ +  AL  + +T+   +L +    +A V    G GE  + +   E + KL+
Sbjct:   82 DANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D RVL    R     Y   Y+ P+P  +LV ++A   Q  TQ    RP+GV LL+ G +E   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G+  + +I
Sbjct:   82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D RVL    R     Y   Y+ P+P  +LV ++A   Q  TQ    RP+GV LL+ G +E   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G+  + +I
Sbjct:   82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208          
The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PSA2_DROME1.336e-1534.88Proteasome subunit alpha type-2 OS=Drosophila mela... [more]
PSA5_SCHPO1.745e-1534.64Probable proteasome subunit alpha type-5 OS=Schizo... [more]
PSMA_METKA2.280e-1534.42Proteasome subunit alpha OS=Methanopyrus kandleri ... [more]
PSA5_TRYBB2.280e-1531.88Proteasome subunit alpha type-5 OS=Trypanosoma bru... [more]
PSA4A_ORYSJ2.977e-1533.96Proteasome subunit alpha type-4-1 OS=Oryza sativa ... [more]
PSA4A_ORYSI2.977e-1533.96Proteasome subunit alpha type-4-1 OS=Oryza sativa ... [more]
PSA4B_ORYSJ3.888e-1533.96Proteasome subunit alpha type-4-2 OS=Oryza sativa ... [more]
PSA4B_ORYSI3.888e-1533.96Proteasome subunit alpha type-4-2 OS=Oryza sativa ... [more]
PSA2_RAT5.078e-1534.88Proteasome subunit alpha type-2 OS=Rattus norvegic... [more]
PSA2_MOUSE5.078e-1534.88Proteasome subunit alpha type-2 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B07-D13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bp
GTTTGTACTGATAAGGCAAGATAAATTGCACCATAAGCGGAAAAATAAAT
TGTCCAACAGAATGATTTCCCGAAGTGCAACCCATATTCCATGGAACCCA
TCAAACACATGCTTAAACTCCTCATCTAAAGACGAAGACGAAGAAGCTGA
CTTCTGGTCCTTGCATCCTCAAATGTCCATTGGAGCTACACCCTCGTCTG
CTGGAGCACCCTGTTCTGAAGCTGCGCCTCCTTCTGCAGCACTGCCTCCT
TCTGCAGCACTATCTGGTGCAGCAGCAGGACCCTCTTCAGTGCCAGCAAT
GTCAAATGAATCAATTAACTTTTGTACAGTTTCTTGATCTAAAATATGAA
ATGGCTCCCCAGCTCCTACCACAGCAACTGTGCAAATAGAACTCTTTAGT
GTTTCTCCTTGTAAGGTTTCCCTTATTGCCATGAGAGCGTCCTTGATCAG
ATCTTCTCTTGTAGATTCTGAAAAGTTCTCAAACCTGCGTTCCAAGTATG
TCTTTGCAGCTTGAGATCGGGACCCAATGGCAAATGCTTGATACTCAAAA
TAGTTCCCACTTGGGCAGTTATAATAAAGGTGGGCTCCTTTTTCATCCAA
GCCAGCAACCAGCAGGCCAACACCATATGGCCGTTTCCATGAGCGCTGGG
TACAGACCTGAGCCTTGTCAGCGAGCTGGACAACAAGGCGGCCGACAGGA
AGCGGCGACTCGTAAGTGTAACTGTAGTTAATACACTCGGATCGCATGTA
CCGAGACAGAACACGGCCGTCGG
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