CX672130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3 Query: 385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771 D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15 Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3 Query: 385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771 D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15 Identity = 47/136 (34.56%), Postives = 79/136 (58.09%), Query Frame = -3 Query: 367 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 771 D +L R + Y+++Y+ P+PV +LV L D Q TQ P+GV L AG D+ G L+ + PSGNY ++A AIG+ +QAA++ L++ +++ + TRE+ ++ AL + +T+ +L S +A V Sbjct: 82 DANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKD--DITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14 Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D RVL R E Y TY P PV +V ++ D Q+ TQ RP+G LL+AG++++ LY PSG YF ++A AIGS A E ++ + + ED IK ALMA+ +T++ + +I + + F L ++ ++K + Sbjct: 86 DARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD--DMNLEDAIKLALMALAKTMENPS-ADNIEVAVITVKDKKFRKLTRDEIEKYL 234
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14 Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = -3 Query: 352 NYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP 729 +Y Y P LV ++A Q TQ RP+GV LL+AG DE G LY PSG+YF ++A AIG S AAKT+LE+R+ + E ED I AL+ ++E+++GE +A++G P Sbjct: 96 SYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND--ELELEDAIHIALLTLKESVEGE-FNGDTIELAIIGDENP 219
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14 Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE-PFHILDQETVQKLID 771 D RVL R E Y TY P+P+ LV ++ D Q+ TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E ++ + E T E+ IK A++A+ + ++ + +S VAV+ E F + E V K ++ Sbjct: 86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD--EMTLEEAIKLAVLALSKIMEEPSPES--IEVAVISVKEKKFKKITPEEVAKCLE 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14 Identity = 46/163 (28.22%), Postives = 84/163 (51.53%), Query Frame = -3 Query: 301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771 D R + + R E N+ + Y P+ V V + D A + + RP+GV LL+AG+DEKG LYY+ PSG + ++ A AIG+ S+ A+T L+ ++ T + K AL +++ ++ +++ + A + F I ++E + +I + + Sbjct: 81 DARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYS--KTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTLE 241
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14 Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D RVL + R TY S + + LV ++AD+ Q TQ RPYGV L+ AG+D+ G L+ P+G EY+A AIGS A ++LE+ + E SE L AL A E +GE LK+ +A + G + I E V+K + Sbjct: 84 DARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE--EGEELKAP--EIASITVGSKYRIYGAEEVKKFL 233
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14 Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = -3 Query: 310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771 D RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK LY PSG YFE++A AIGS A E + + + E IK A++A+ +TL+ E SI + + + LD+E V K ++ Sbjct: 86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSD--DIDMEGAIKLAILALAKTLE-EPSPESIEVAYITLDEKRWKKLDKEEVAKYLN 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14 Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = -3 Query: 409 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 771 DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ L+ PSG Y YQA AIG A +LE+ ++ + E+ I AL A+ TL+ Sbjct: 86 DGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLNVEETILLALKALSATLK 204 The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bpback to top |