CX672130

Overview
NameCX672130
Unique NameCX672130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D RVL    R     Y   Y+ P+P  +LV ++A   Q  TQ    RP+GV LL+ G +E   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G+  + +I
Sbjct:   82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.078e-15
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = -3
Query:  385 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 771
            D RVL    R     Y   Y+ P+P  +LV ++A   Q  TQ    RP+GV LL+ G +E   +L+ + PSG YF ++A A+G      KT+LE+R+    E   ED I  A++ ++E+ +G+  + +I
Sbjct:   82 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15
Identity = 47/136 (34.56%), Postives = 79/136 (58.09%), Query Frame = -3
Query:  367 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 771
            D  +L    R +   Y+++Y+ P+PV +LV  L D  Q  TQ     P+GV  L AG D+  G  L+ + PSGNY  ++A AIG+ +QAA++ L++ +++  + TRE+ ++ AL  + +T+   +L S    +A V
Sbjct:   82 DANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKD--DITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.131e-14
Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D RVL    R E   Y  TY  P PV  +V ++ D  Q+ TQ    RP+G  LL+AG++++   LY   PSG YF ++A AIGS    A    E ++ +  +   ED IK ALMA+ +T++  +   +I    +    + F  L ++ ++K +
Sbjct:   86 DARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD--DMNLEDAIKLALMALAKTMENPS-ADNIEVAVITVKDKKFRKLTRDEIEKYL 234          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = -3
Query:  352 NYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP 729
            +Y   Y    P   LV ++A   Q  TQ    RP+GV LL+AG DE  G  LY   PSG+YF ++A AIG  S AAKT+LE+R+ +  E   ED I  AL+ ++E+++GE        +A++G   P
Sbjct:   96 SYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND--ELELEDAIHIALLTLKESVEGE-FNGDTIELAIIGDENP 219          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGE-PFHILDQETVQKLID 771
            D RVL    R E   Y  TY  P+P+  LV ++ D  Q+ TQ    RP+G  LL+AG++EK   L+   PSG YFE++A AIGS    A    E ++ +  E T E+ IK A++A+ + ++  + +S    VAV+   E  F  +  E V K ++
Sbjct:   86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD--EMTLEEAIKLAVLALSKIMEEPSPES--IEVAVISVKEKKFKKITPEEVAKCLE 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.930e-14
Identity = 46/163 (28.22%), Postives = 84/163 (51.53%), Query Frame = -3
Query:  301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771
            D R +  + R E  N+ + Y  P+ V   V  + D A      +   +    RP+GV LL+AG+DEKG  LYY+ PSG + ++ A AIG+ S+ A+T L+ ++      T  +  K AL  +++ ++     +++    +  A + F I ++E +  +I + +
Sbjct:   81 DARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYS--KTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTLE 241          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D RVL  + R        TY S + +  LV ++AD+ Q  TQ    RPYGV L+ AG+D+ G  L+   P+G   EY+A AIGS   A  ++LE+ + E  SE     L   AL A  E  +GE LK+    +A +  G  + I   E V+K +
Sbjct:   84 DARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE--EGEELKAP--EIASITVGSKYRIYGAEEVKKFL 233          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D RVL    R E   Y  TY  P+P+  LV ++ D  Q  TQ    RP+G  LL+AG++EK   LY   PSG YFE++A AIGS    A    E  + +  +   E  IK A++A+ +TL+ E    SI    +    + +  LD+E V K ++
Sbjct:   86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSD--DIDMEGAIKLAILALAKTLE-EPSPESIEVAYITLDEKRWKKLDKEEVAKYLN 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14
Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = -3
Query:  409 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 771
            DGRVL  Y R+  + +   Y+ P+ +  L   +AD  Q+ TQ    RP+GV L++AG+D+    L+   PSG Y  YQA AIG     A  +LE+ ++   +   E+ I  AL A+  TL+
Sbjct:   86 DGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLNVEETILLALKALSATLK 204          
The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PSA2_HUMAN5.078e-1534.88Proteasome subunit alpha type-2 OS=Homo sapiens GN... [more]
PSA2_BOVIN5.078e-1534.88Proteasome subunit alpha type-2 OS=Bos taurus GN=P... [more]
PSA4_PETHY8.663e-1534.56Proteasome subunit alpha type-4 OS=Petunia hybrida... [more]
PSMA_PYRFU1.131e-1433.33Proteasome subunit alpha OS=Pyrococcus furiosus GN... [more]
PSA2_YEAST1.478e-1440.16Proteasome component Y7 OS=Saccharomyces cerevisia... [more]
PSMA_THESM1.930e-1436.13Proteasome subunit alpha OS=Thermococcus sibiricus... [more]
PSA5_DICDI1.930e-1428.22Proteasome subunit alpha type-5 OS=Dictyostelium d... [more]
PSMA_THEVO3.292e-1436.36Proteasome subunit alpha OS=Thermoplasma volcanium... [more]
PSMA_THEGJ3.292e-1436.36Proteasome subunit alpha OS=Thermococcus gammatole... [more]
PSMA_SULSO4.299e-1436.36Proteasome subunit alpha OS=Sulfolobus solfataricu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B07-D13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bp
GTTTGTACTGATAAGGCAAGATAAATTGCACCATAAGCGGAAAAATAAAT
TGTCCAACAGAATGATTTCCCGAAGTGCAACCCATATTCCATGGAACCCA
TCAAACACATGCTTAAACTCCTCATCTAAAGACGAAGACGAAGAAGCTGA
CTTCTGGTCCTTGCATCCTCAAATGTCCATTGGAGCTACACCCTCGTCTG
CTGGAGCACCCTGTTCTGAAGCTGCGCCTCCTTCTGCAGCACTGCCTCCT
TCTGCAGCACTATCTGGTGCAGCAGCAGGACCCTCTTCAGTGCCAGCAAT
GTCAAATGAATCAATTAACTTTTGTACAGTTTCTTGATCTAAAATATGAA
ATGGCTCCCCAGCTCCTACCACAGCAACTGTGCAAATAGAACTCTTTAGT
GTTTCTCCTTGTAAGGTTTCCCTTATTGCCATGAGAGCGTCCTTGATCAG
ATCTTCTCTTGTAGATTCTGAAAAGTTCTCAAACCTGCGTTCCAAGTATG
TCTTTGCAGCTTGAGATCGGGACCCAATGGCAAATGCTTGATACTCAAAA
TAGTTCCCACTTGGGCAGTTATAATAAAGGTGGGCTCCTTTTTCATCCAA
GCCAGCAACCAGCAGGCCAACACCATATGGCCGTTTCCATGAGCGCTGGG
TACAGACCTGAGCCTTGTCAGCGAGCTGGACAACAAGGCGGCCGACAGGA
AGCGGCGACTCGTAAGTGTAACTGTAGTTAATACACTCGGATCGCATGTA
CCGAGACAGAACACGGCCGTCGG
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