CX672130

Overview
NameCX672130
Unique NameCX672130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14
Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D RVL    R E   +  TY  P P+  +V ++ D  Q+ TQ    RP+G  LL+AG++EK   LY   PSG YF ++A AIGS    A    E ++++  + + E+ IK A+ A+ +T++    E ++ +I TV      + F  L +E ++K ++
Sbjct:   86 DARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKD--DMSLEEAIKLAIFALAKTMEKPSAENIEVAIITV----KDKKFRKLSREEIEKYLN 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.299e-14
Identity = 46/156 (29.49%), Postives = 84/156 (53.85%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D R++    R EC ++  T E P+ V  +   +A   Q  TQ + +RP+G+  L+ G D  G   LY   PSG Y  ++A AIG  ++  + +LE+ + + + ++  D IK A+ A+ E +Q  G+ ++     +AV+   +P  IL+ + ++ L+
Sbjct:   81 DARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIE-----LAVIRRNQPLKILESKEIETLV 231          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = -3
Query:  400 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 771
            D RVL    R E   Y  TY  P+P+  LV ++ D  Q  TQ    RP+G  LL+AG++EK   L+   PSG YFE++A AIGS    A    E  + +  +  ++D IK A++A+ +TL+  T
Sbjct:   86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = -3
Query:  400 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 771
            D RVL    R E   Y  TY  P+P+  LV ++ D  Q  TQ    RP+G  LL+AG++EK   L+   PSG YFE++A AIGS    A    E  + +  +  ++D IK A++A+ +TL+  T
Sbjct:   86 DARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D RVL  + R        TY S + +  LV ++AD+ Q  TQ    RPYGV ++ AGLD  G  L+   P+G   EY+  +IG+       YLE+ + EN SE   ++ I+  + A++  +  E+       +A +  GE FH+   E V K ++
Sbjct:   84 DARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLDSIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSE---DEAIRMGIAALKSAVADESSMKE-PEIASIKMGETFHVFTSEEVSKYLN 234          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14
Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = -3
Query:  397 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ-GETL 771
            DGR+L  Y R+  + +   Y+ P+ +  L   ++D  Q+ TQ    RP+GV L+V G+D     L+   PSG +  YQA AIG     A  YLE+ ++   + + E+ I  AL A++ TL+ GE L
Sbjct:   86 DGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYK--EDLSVEETILLALNALKVTLKPGEKL 209          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13
Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D RVL    R E   Y  TY  P+P+  LV ++ D  Q  TQ    RP+G  LL+AG+++K   LY   PSG YFE++A AIGS    A    E  + +  +   E  IK A++A+ +TL+ E    SI    +    + +  +D+E V K +
Sbjct:   86 DARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSD--DLDMEGAIKLAILALAKTLE-EPSPESIEVAYITMKDKRWKKMDKEEVAKYL 234          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13
Identity = 44/154 (28.57%), Postives = 82/154 (53.25%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D R+L    + EC ++   +E+ + +  +   LA   Q  TQ + +RP+G+  L+ G+D  G A L++  PSG + EY+A A G  +   + + E+ + +   +T+ D IK A+ A+ E  Q   ++     VAV+  G+P  +LD   + +++
Sbjct:   81 DARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMR---LEVAVLENGKPMKMLDSVVISEIV 231          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13
Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D RVL    R E   +  TY  P P+  +V ++ D  Q+ TQ    RP+G  LL+AG+++K   LY   PSG YF ++A AIGS    A    E ++ +  + T ++ IK A+ A+ +T++    E ++ ++ TV      + F  L +E ++K +
Sbjct:   86 DARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRD--DMTLDEAIKLAIFALAKTMEKPSAENIEVAVITV----KDKKFRKLSKEEIEKFL 234          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771
            D R+L    + EC ++    E P+ +  +   +A   Q  TQ + +RP+G+  L+ G D  G+ +L+   PSG ++EY+A A G  ++  + + E+++     ST    +K A+ A+ E  Q          VA++  G+P  +LD++ + + +D
Sbjct:   79 DARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQS---GQHNLEVAIMENGKPLKMLDRKVILEYLD 230          
The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PSMA_PYRHO4.299e-1433.12Proteasome subunit alpha OS=Pyrococcus horikoshii ... [more]
PSA7_CARAU4.299e-1429.49Proteasome subunit alpha type-7 OS=Carassius aurat... [more]
PSMA_THEK17.333e-1438.71Proteasome subunit alpha OS=Thermococcus sp. (stra... [more]
PSMA_PYRKO7.333e-1438.71Proteasome subunit alpha OS=Pyrococcus kodakaraens... [more]
PSMA_PICTO7.333e-1432.26Proteasome subunit alpha OS=Picrophilus torridus G... [more]
PSMA_METS57.333e-1435.71Proteasome subunit alpha OS=Metallosphaera sedula ... [more]
PSMA_THEON1.251e-1335.29Proteasome subunit alpha OS=Thermococcus onnurineu... [more]
PSA72_DROME1.251e-1328.57Proteasome subunit alpha type-7-1A OS=Drosophila m... [more]
PSMA_PYRAB2.134e-1332.05Proteasome subunit alpha OS=Pyrococcus abyssi GN=p... [more]
PSA71_DROVI2.134e-1327.10Proteasome subunit alpha type-7-1 OS=Drosophila vi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B07-D13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bp
GTTTGTACTGATAAGGCAAGATAAATTGCACCATAAGCGGAAAAATAAAT
TGTCCAACAGAATGATTTCCCGAAGTGCAACCCATATTCCATGGAACCCA
TCAAACACATGCTTAAACTCCTCATCTAAAGACGAAGACGAAGAAGCTGA
CTTCTGGTCCTTGCATCCTCAAATGTCCATTGGAGCTACACCCTCGTCTG
CTGGAGCACCCTGTTCTGAAGCTGCGCCTCCTTCTGCAGCACTGCCTCCT
TCTGCAGCACTATCTGGTGCAGCAGCAGGACCCTCTTCAGTGCCAGCAAT
GTCAAATGAATCAATTAACTTTTGTACAGTTTCTTGATCTAAAATATGAA
ATGGCTCCCCAGCTCCTACCACAGCAACTGTGCAAATAGAACTCTTTAGT
GTTTCTCCTTGTAAGGTTTCCCTTATTGCCATGAGAGCGTCCTTGATCAG
ATCTTCTCTTGTAGATTCTGAAAAGTTCTCAAACCTGCGTTCCAAGTATG
TCTTTGCAGCTTGAGATCGGGACCCAATGGCAAATGCTTGATACTCAAAA
TAGTTCCCACTTGGGCAGTTATAATAAAGGTGGGCTCCTTTTTCATCCAA
GCCAGCAACCAGCAGGCCAACACCATATGGCCGTTTCCATGAGCGCTGGG
TACAGACCTGAGCCTTGTCAGCGAGCTGGACAACAAGGCGGCCGACAGGA
AGCGGCGACTCGTAAGTGTAACTGTAGTTAATACACTCGGATCGCATGTA
CCGAGACAGAACACGGCCGTCGG
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