CX672130

Overview
NameCX672130
Unique NameCX672130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D R++    R EC ++  T E P+ V  +   +A   Q  TQ + +RP+G+  L+ G D  G   LY   PSG Y  ++A AIG  +++ + +LE+ + + +  T +  IK  + A+ E +Q  G+ ++     +AV+   +P  IL+ E +++ +
Sbjct:   79 DARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D R++    R EC ++  T E P+ V  +   +A   Q  TQ + +RP+G+  L+ G D  G   LY   PSG Y  ++A AIG  +++ + +LE+ + + +  T +  IK  + A+ E +Q  G+ ++     +AV+   +P  IL+ E +++ +
Sbjct:   79 DARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = -3
Query:  310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF--ENFSESTREDLIKDALMAIRETLQGETL---KSSICTVAVVGAGEPFHILDQETVQKLID 771
            DG VL   +R     Y + +   +P  +LV  L D  Q  TQ   KRP+GV  L  G D + G  LY + PSGNY  ++A  IG +S AA   L++    + +   + E+    A+  +  TL  ++L   K  I  V   G    FHIL++  + +LI+
Sbjct:   81 DGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12
Identity = 43/160 (26.88%), Postives = 83/160 (51.88%), Query Frame = -3
Query:  301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771
            D RV+    R EC ++  T E P+ V  +   +A   Q  TQ + +RP+G+  L+ G D+ G + LY   PSG Y  ++A AIG  ++  + +LE+ +   + ++  + IK A+ A+ E +Q  G+ ++     +A++   +P  +   + V+  +   +
Sbjct:   87 DARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 241          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12
Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D + L    R E  N+ +TY   + V  +   +++ A     +     +  RP+GV LL  G+DEKG  L++  PSG + +  A AIGS S+ A++ L+  +     +T ++ IK +L+ +++ ++ E L ++   +A V  G+ FH+  +E ++++I
Sbjct:   84 DAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSTTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771
            D RVL      EC +Y  T E    V  +   +A   Q  TQ    RP+G+  L+ G D  G  +LY   PSG+Y  ++A AIG  S++   +LE+   N+++ + E+ IK A+ A+ E ++       I   AV+   +P  +LD++ + KL+
Sbjct:   82 DSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEK---NYTDVSEEESIKLAVRALLEIVESGNKNIEI---AVIRNKQPIVLLDEQEIDKLV 229          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 50/159 (31.45%), Postives = 78/159 (49.06%), Query Frame = -3
Query:  298 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDI 771
            D  +L    R    NY  TY   +PV  LV +L+D  Q  TQ    RP+GV  + AG D++ G  LY + PSGNY  ++A ++G+ + AA+T L+  +++  +   +D I+ AL  + +T     L       A +  G      D E  QK+    +I
Sbjct:   83 DAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD--DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGAN----DGEVYQKIFKPQEI 235          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12
Identity = 44/113 (38.94%), Postives = 59/113 (52.21%), Query Frame = -3
Query:  436 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST-REDLIKDA 771
            DGR +    +SE  NY   Y   +PV  L  ++A    +CT   W RP+G G+++ G D  G  LY   PSG  + Y   AIG   QAAKT +E+     SE T RE +I+ A
Sbjct:   84 DGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKL--KLSEMTCREGIIEVA 194          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = -3
Query:  307 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDAL----MAIRETLQGE-----TLKSSICTVAVVGAGEPFHILDQETVQKLIDS 771
            DGR+L  Y R   + +   Y  P PV  +   +AD  Q  TQ    RP+GV L+ AG++  G   +Y   P G YF ++A AIGS  Q A    E+ +   S+ + E+  K AL      IR+T++ +     TL   +    +      F  + +E V++++DS
Sbjct:   88 DGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYR--SDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQVKEIVDS 250          
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 43/160 (26.88%), Postives = 82/160 (51.25%), Query Frame = -3
Query:  301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771
            D RV+    R EC ++  T E P+ V  +   +A   Q  TQ + +RP+G+  L+ G D+ G   LY   PSG Y  ++A AIG  ++  + +LE+ +   + ++  + IK A+ A+ E +Q  G+ ++     +A++   +P  +   + V+  +   +
Sbjct:   81 DARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 235          
The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PSA7B_XENLA8.108e-1328.85Proteasome subunit alpha type-7-B OS=Xenopus laevi... [more]
PSA7A_XENLA8.108e-1328.85Proteasome subunit alpha type-7-A OS=Xenopus laevi... [more]
PSA4L_DROME1.059e-1232.50Proteasome subunit alpha type-4-like OS=Drosophila... [more]
PSA7L_HUMAN1.383e-1226.88Proteasome subunit alpha type-7-like OS=Homo sapie... [more]
PSA5_RAT1.383e-1228.48Proteasome subunit alpha type-5 OS=Rattus norvegic... [more]
PSA7_DICDI1.806e-1231.82Proteasome subunit alpha type-7 OS=Dictyostelium d... [more]
PSA4_YEAST1.806e-1231.45Proteasome component Y13 OS=Saccharomyces cerevisi... [more]
PSA3_SPIOL1.806e-1238.94Proteasome subunit alpha type-3 OS=Spinacia olerac... [more]
PSMA_AERPE2.359e-1230.91Proteasome subunit alpha OS=Aeropyrum pernix GN=ps... [more]
PSA7L_MACFA2.359e-1226.88Proteasome subunit alpha type-7-like OS=Macaca fas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B07-D13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bp
GTTTGTACTGATAAGGCAAGATAAATTGCACCATAAGCGGAAAAATAAAT
TGTCCAACAGAATGATTTCCCGAAGTGCAACCCATATTCCATGGAACCCA
TCAAACACATGCTTAAACTCCTCATCTAAAGACGAAGACGAAGAAGCTGA
CTTCTGGTCCTTGCATCCTCAAATGTCCATTGGAGCTACACCCTCGTCTG
CTGGAGCACCCTGTTCTGAAGCTGCGCCTCCTTCTGCAGCACTGCCTCCT
TCTGCAGCACTATCTGGTGCAGCAGCAGGACCCTCTTCAGTGCCAGCAAT
GTCAAATGAATCAATTAACTTTTGTACAGTTTCTTGATCTAAAATATGAA
ATGGCTCCCCAGCTCCTACCACAGCAACTGTGCAAATAGAACTCTTTAGT
GTTTCTCCTTGTAAGGTTTCCCTTATTGCCATGAGAGCGTCCTTGATCAG
ATCTTCTCTTGTAGATTCTGAAAAGTTCTCAAACCTGCGTTCCAAGTATG
TCTTTGCAGCTTGAGATCGGGACCCAATGGCAAATGCTTGATACTCAAAA
TAGTTCCCACTTGGGCAGTTATAATAAAGGTGGGCTCCTTTTTCATCCAA
GCCAGCAACCAGCAGGCCAACACCATATGGCCGTTTCCATGAGCGCTGGG
TACAGACCTGAGCCTTGTCAGCGAGCTGGACAACAAGGCGGCCGACAGGA
AGCGGCGACTCGTAAGTGTAACTGTAGTTAATACACTCGGATCGCATGTA
CCGAGACAGAACACGGCCGTCGG
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