CX672130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13 Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E +++ + Sbjct: 79 DARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.108e-13 Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E +++ + Sbjct: 79 DARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = -3 Query: 310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF--ENFSESTREDLIKDALMAIRETLQGETL---KSSICTVAVVGAGEPFHILDQETVQKLID 771 DG VL +R Y + + +P +LV L D Q TQ KRP+GV L G D + G LY + PSGNY ++A IG +S AA L++ + + + E+ A+ + TL ++L K I V G FHIL++ + +LI+ Sbjct: 81 DGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 43/160 (26.88%), Postives = 83/160 (51.88%), Query Frame = -3 Query: 301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771 D RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G + LY PSG Y ++A AIG ++ + +LE+ + + ++ + IK A+ A+ E +Q G+ ++ +A++ +P + + V+ + + Sbjct: 87 DARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 241
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + +T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 84 DAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSTTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D RVL EC +Y T E V + +A Q TQ RP+G+ L+ G D G +LY PSG+Y ++A AIG S++ +LE+ N+++ + E+ IK A+ A+ E ++ I AV+ +P +LD++ + KL+ Sbjct: 82 DSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEK---NYTDVSEEESIKLAVRALLEIVESGNKNIEI---AVIRNKQPIVLLDEQEIDKLV 229
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 50/159 (31.45%), Postives = 78/159 (49.06%), Query Frame = -3 Query: 298 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDI 771 D +L R NY TY +PV LV +L+D Q TQ RP+GV + AG D++ G LY + PSGNY ++A ++G+ + AA+T L+ +++ + +D I+ AL + +T L A + G D E QK+ +I Sbjct: 83 DAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD--DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGAN----DGEVYQKIFKPQEI 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 44/113 (38.94%), Postives = 59/113 (52.21%), Query Frame = -3 Query: 436 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST-REDLIKDA 771 DGR + +SE NY Y +PV L ++A +CT W RP+G G+++ G D G LY PSG + Y AIG QAAKT +E+ SE T RE +I+ A Sbjct: 84 DGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKL--KLSEMTCREGIIEVA 194
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = -3 Query: 307 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDAL----MAIRETLQGE-----TLKSSICTVAVVGAGEPFHILDQETVQKLIDS 771 DGR+L Y R + + Y P PV + +AD Q TQ RP+GV L+ AG++ G +Y P G YF ++A AIGS Q A E+ + S+ + E+ K AL IR+T++ + TL + + F + +E V++++DS Sbjct: 88 DGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYR--SDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQVKEIVDS 250
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 43/160 (26.88%), Postives = 82/160 (51.25%), Query Frame = -3 Query: 301 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 771 D RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + ++ + IK A+ A+ E +Q G+ ++ +A++ +P + + V+ + + Sbjct: 81 DARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 235 The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bpback to top |