CX672130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 45/158 (28.48%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 84 DAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 45/158 (28.48%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 84 DAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 45/158 (28.48%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 84 DAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = -3 Query: 388 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ-GETLKSS 771 DGR+L Y RS+ + + Y+ P+ + L ++D Q TQ RP+GV L+V G+D+ K L PSG + Y A AIG A YLE+ ++ + + I AL A+ TL+ GE L S Sbjct: 86 DGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYK--EDLDIQSTILLALRALMATLKPGEKLNYS 213
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = -3 Query: 478 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 771 D R+L Y R +++ + Y+ P+ V L + + Q TQ RP+GV LL+AG+D GA LY PSG Y Y A AIG+ S +LE+ ++ Sbjct: 85 DARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYK 182
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 45/156 (28.85%), Postives = 81/156 (51.92%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R++ R EC ++ T P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL E ++K + Sbjct: 85 DARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILSPEEIEKYV 235
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 45/156 (28.85%), Postives = 82/156 (52.56%), Query Frame = -3 Query: 313 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 771 D R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ + IL+ E ++K + Sbjct: 79 DARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQSLKILNPEEIEKYV 229
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 43/153 (28.10%), Postives = 80/153 (52.29%), Query Frame = -3 Query: 322 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQ 771 D RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + S ++ IK A+ A+ E +Q G+ ++ +A++ +P + + ++ Sbjct: 81 DARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIE-----LAIIRRDQPLKMFSAKEIE 228
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.081e-12 Identity = 40/150 (26.67%), Postives = 75/150 (50.00%), Query Frame = -3 Query: 325 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETV 771 D R++ + EC ++ E P+ + + +A Q TQ + +RP+G+ L+ G D G AHL+ PSG ++EY+A A G ++ + + E+ + + +K A+ A+ E Q + VA++ G+P +LD + + Sbjct: 81 DARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQS---GQNNLEVAIMENGKPLKMLDTDVI 227
BLAST of CX672130 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = -3 Query: 310 DGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 771 D R + R E TY P+ V L ++ D Q+ TQ RP+G L++ G++ +G L+ PSG EY+A AIG+ AA E+++ + + I+ AL A+ E +G+T S+ + A + + L + ++ ++ Sbjct: 85 DARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSD--DMNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHVE 236 The following BLAST results are available for this feature:
BLAST of CX672130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672130 ID=CX672130; Name=CX672130; organism=Citrus sinensis; type=EST; length=773bpback to top |