EY664660

Overview
NameEY664660
Unique NameEY664660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_DAUCA (Actin-1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKC 108
            + GSILASLSTFQQMWISKGEYDESGPSIVHRKC
Sbjct:  343 IGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 376          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: POTEE_HUMAN (POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            V GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 1041 VGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1075          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTBM_HUMAN (Beta-actin-like protein 3 OS=Homo sapiens GN=ACTBL3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            V GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 VGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_PUCGR (Actin OS=Puccinia graminis PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_NEUCR (Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_LUMRU (Actin (Fragment) OS=Lumbricus rubellus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  338 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 372          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_GAEGA (Actin OS=Gaeumannomyces graminis var. avenae GN=ACT PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_EXODE (Actin OS=Exophiala dermatitidis PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
The following BLAST results are available for this feature:
BLAST of EY664660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ACT1_DAUCA1.036e-1194.12Actin-1 OS=Daucus carota PE=2 SV=1[more]
POTEE_HUMAN1.353e-1194.29POTE ankyrin domain family member E OS=Homo sapien... [more]
ACTBM_HUMAN1.353e-1194.29Beta-actin-like protein 3 OS=Homo sapiens GN=ACTBL... [more]
ACT_PUCGR1.767e-1191.43Actin OS=Puccinia graminis PE=3 SV=1[more]
ACT_PLAMG1.767e-1191.43Actin, adductor muscle OS=Placopecten magellanicus... [more]
ACT_NEUCR1.767e-1191.43Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2[more]
ACT_LUMRU1.767e-1191.43Actin (Fragment) OS=Lumbricus rubellus PE=2 SV=1[more]
ACT_HYDAT1.767e-1191.43Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1[more]
ACT_GAEGA1.767e-1191.43Actin OS=Gaeumannomyces graminis var. avenae GN=AC... [more]
ACT_EXODE1.767e-1191.43Actin OS=Exophiala dermatitidis PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664660 ID=EY664660; Name=EY664660; organism=Citrus sinensis; type=EST; length=622bp
CCACGCGTCCGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGAT
GTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACA
GGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTC
CATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACA
TGGAGAAGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTG
ATGTTATTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTA
CTCAACCGTCTTCCTTGCCTTGCATTCATCTGGTGTTCAACCAAGTCTTT
TTTCTTTTTTTTCCTTTTTTTTTTTTAAAGTAGGATGTTTGTAGCTGGAG
ATGAAGAGTGGTTGTGATGCTTTTCTATTTCATTTTCTAAATTTTCATAT
TTGAAGGTTTTTTTTCTCCCCCTCTCAAAAGGAACATTAATGTTAATAGC
TATTGTATGAGAAAACTTTAATTAGTGTCAGCTTGCAGTCATAAATTTGG
TTATTAAAATATATTTAATACTTGTTTGAGAGCTTTCAATGATGAATCAA
TGTCTTATTTCANNNAAAAAAA
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