EY664660

Overview
NameEY664660
Unique NameEY664660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:1143..1764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_CRAGI (Actin OS=Crassostrea gigas PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_BOTFU (Actin OS=Botryotinia fuckeliana GN=actA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_ASPOR (Actin OS=Aspergillus oryzae GN=act1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT_AJECG (Actin OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=HCBG_08711 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTY_LIMPO (Actin-11 OS=Limulus polyphemus PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_PISOC (Actin, muscle OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_LYTPI (Actin, muscle (Fragment) OS=Lytechinus pictus PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  138 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 172
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_HELTB (Actin, cytoskeletal OS=Heliocidaris tuberculata PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_HELER (Actin, cytoskeletal OS=Heliocidaris erythrogramma PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_APLCA (Actin, muscle OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of EY664660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ACT_CRAGI1.767e-1191.43Actin OS=Crassostrea gigas PE=2 SV=1[more]
ACT_BOTFU1.767e-1191.43Actin OS=Botryotinia fuckeliana GN=actA PE=3 SV=1[more]
ACT_ASPOR1.767e-1191.43Actin OS=Aspergillus oryzae GN=act1 PE=3 SV=1[more]
ACT_AJECG1.767e-1191.43Actin OS=Ajellomyces capsulata (strain ATCC 26029 ... [more]
ACTY_LIMPO1.767e-1191.43Actin-11 OS=Limulus polyphemus PE=2 SV=1[more]
ACTM_PISOC1.767e-1191.43Actin, muscle OS=Pisaster ochraceus PE=3 SV=1[more]
ACTM_LYTPI1.767e-1191.43Actin, muscle (Fragment) OS=Lytechinus pictus PE=3... [more]
ACTM_HELTB1.767e-1191.43Actin, cytoskeletal OS=Heliocidaris tuberculata PE... [more]
ACTM_HELER1.767e-1191.43Actin, cytoskeletal OS=Heliocidaris erythrogramma ... [more]
ACTM_APLCA1.767e-1191.43Actin, muscle OS=Aplysia californica PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664660 ID=EY664660; Name=EY664660; organism=Citrus sinensis; type=EST; length=622bp
CCACGCGTCCGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGAT
GTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACA
GGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTC
CATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACA
TGGAGAAGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTG
ATGTTATTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTA
CTCAACCGTCTTCCTTGCCTTGCATTCATCTGGTGTTCAACCAAGTCTTT
TTTCTTTTTTTTCCTTTTTTTTTTTTAAAGTAGGATGTTTGTAGCTGGAG
ATGAAGAGTGGTTGTGATGCTTTTCTATTTCATTTTCTAAATTTTCATAT
TTGAAGGTTTTTTTTCTCCCCCTCTCAAAAGGAACATTAATGTTAATAGC
TATTGTATGAGAAAACTTTAATTAGTGTCAGCTTGCAGTCATAAATTTGG
TTATTAAAATATATTTAATACTTGTTTGAGAGCTTTCAATGATGAATCAA
TGTCTTATTTCANNNAAAAAAA
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