EY664660

Overview
NameEY664660
Unique NameEY664660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTS_CARAU (Actin, alpha skeletal muscle OS=Carassius auratus GN=acta1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTS_BOVIN (Actin, alpha skeletal muscle OS=Bos taurus GN=ACTA1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTS_ATRMM (Actin, alpha skeletal muscle OS=Atractaspis microlepidota microlepidota GN=ACTA1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTM_CIOSA (Actin, muscle OS=Ciona savignyi PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  344 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 378
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTB_XENBO (Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILA LSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILALLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT3_XENLA (Actin, alpha sarcomeric/skeletal OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT2_XENTR (Actin, alpha sarcomeric/cardiac OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT2_XENLA (Actin, alpha sarcomeric/cardiac OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  343 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_SOYBN (Actin-1 OS=Glycine max GN=SAC1 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI K EYDESGPSIVH+KCF
Sbjct:  343 IGGSILASLSTFQQMWIXKAEYDESGPSIVHKKCF 377
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_PLAYO (Actin-1 OS=Plasmodium yoelii yoelii GN=PY02240 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  342 IGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of EY664660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ACTS_CARAU8.770e-1185.71Actin, alpha skeletal muscle OS=Carassius auratus ... [more]
ACTS_BOVIN8.770e-1185.71Actin, alpha skeletal muscle OS=Bos taurus GN=ACTA... [more]
ACTS_ATRMM8.770e-1185.71Actin, alpha skeletal muscle OS=Atractaspis microl... [more]
ACTM_CIOSA8.770e-1185.71Actin, muscle OS=Ciona savignyi PE=2 SV=1[more]
ACTB_XENBO8.770e-1188.57Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb P... [more]
ACT3_XENLA8.770e-1185.71Actin, alpha sarcomeric/skeletal OS=Xenopus laevis... [more]
ACT2_XENTR8.770e-1185.71Actin, alpha sarcomeric/cardiac OS=Xenopus tropica... [more]
ACT2_XENLA8.770e-1185.71Actin, alpha sarcomeric/cardiac OS=Xenopus laevis ... [more]
ACT1_SOYBN8.770e-1185.71Actin-1 OS=Glycine max GN=SAC1 PE=3 SV=2[more]
ACT1_PLAYO8.770e-1185.71Actin-1 OS=Plasmodium yoelii yoelii GN=PY02240 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664660 ID=EY664660; Name=EY664660; organism=Citrus sinensis; type=EST; length=622bp
CCACGCGTCCGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGAT
GTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACA
GGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTC
CATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACA
TGGAGAAGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTG
ATGTTATTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTA
CTCAACCGTCTTCCTTGCCTTGCATTCATCTGGTGTTCAACCAAGTCTTT
TTTCTTTTTTTTCCTTTTTTTTTTTTAAAGTAGGATGTTTGTAGCTGGAG
ATGAAGAGTGGTTGTGATGCTTTTCTATTTCATTTTCTAAATTTTCATAT
TTGAAGGTTTTTTTTCTCCCCCTCTCAAAAGGAACATTAATGTTAATAGC
TATTGTATGAGAAAACTTTAATTAGTGTCAGCTTGCAGTCATAAATTTGG
TTATTAAAATATATTTAATACTTGTTTGAGAGCTTTCAATGATGAATCAA
TGTCTTATTTCANNNAAAAAAA
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