EY664660

Overview
NameEY664660
Unique NameEY664660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFX (Actin-1 OS=Plasmodium falciparum (isolate HB3) PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  342 IGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFO (Actin-1 OS=Plasmodium falciparum (isolate NF54) PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  342 IGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_PLAF7 (Actin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PFL2215w PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  342 IGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_PLABA (Actin-1 OS=Plasmodium berghei (strain Anka) GN=PB000323.01.0 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  341 IGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT1_HALRO (Actin, muscle 1A OS=Halocynthia roretzi GN=MA1A PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:  344 IGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 378
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACT17_DICDI (Actin-17 OS=Dictyostelium discoideum GN=act17 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GS+L+SLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  340 IGGSMLSSLSTFQQMWISKEEYDESGPSIVHRKCF 374
The following BLAST results are available for this feature:
BLAST of EY664660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ACT1_PLAFX8.770e-1185.71Actin-1 OS=Plasmodium falciparum (isolate HB3) PE=... [more]
ACT1_PLAFO8.770e-1185.71Actin-1 OS=Plasmodium falciparum (isolate NF54) PE... [more]
ACT1_PLAF78.770e-1185.71Actin-1 OS=Plasmodium falciparum (isolate 3D7) GN=... [more]
ACT1_PLABA8.770e-1185.71Actin-1 OS=Plasmodium berghei (strain Anka) GN=PB0... [more]
ACT1_HALRO8.770e-1185.71Actin, muscle 1A OS=Halocynthia roretzi GN=MA1A PE... [more]
ACT17_DICDI8.770e-1185.71Actin-17 OS=Dictyostelium discoideum GN=act17 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664660 ID=EY664660; Name=EY664660; organism=Citrus sinensis; type=EST; length=622bp
CCACGCGTCCGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGAT
GTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACA
GGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTC
CATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACA
TGGAGAAGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTG
ATGTTATTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTA
CTCAACCGTCTTCCTTGCCTTGCATTCATCTGGTGTTCAACCAAGTCTTT
TTTCTTTTTTTTCCTTTTTTTTTTTTAAAGTAGGATGTTTGTAGCTGGAG
ATGAAGAGTGGTTGTGATGCTTTTCTATTTCATTTTCTAAATTTTCATAT
TTGAAGGTTTTTTTTCTCCCCCTCTCAAAAGGAACATTAATGTTAATAGC
TATTGTATGAGAAAACTTTAATTAGTGTCAGCTTGCAGTCATAAATTTGG
TTATTAAAATATATTTAATACTTGTTTGAGAGCTTTCAATGATGAATCAA
TGTCTTATTTCANNNAAAAAAA
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