EY664660

Overview
NameEY664660
Unique NameEY664660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:1143..1764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTG_CHICK (Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTG_CEPAC (Actin, gamma OS=Cephalosporium acremonium GN=ACT PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTG_BOVIN (Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTG_ANSAN (Actin, cytoplasmic 2 OS=Anser anser anser GN=ACTG1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTF_STRPU (Actin, cytoskeletal 3B OS=Strongylocentrotus purpuratus GN=CYIIIB PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTE_STRPU (Actin, cytoskeletal 3A OS=Strongylocentrotus purpuratus GN=CYIIIA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTD_STRPU (Actin, cytoskeletal 2B OS=Strongylocentrotus purpuratus GN=CYIIB PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTC_STYPL (Actin, cytoplasmic OS=Styela plicata PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTC_STRPU (Actin, cytoskeletal 2A OS=Strongylocentrotus purpuratus GN=CYIIA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY664660 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    7 VRGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 111
            + GSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of EY664660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
ACTG_CHICK1.767e-1191.43Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=... [more]
ACTG_CEPAC1.767e-1191.43Actin, gamma OS=Cephalosporium acremonium GN=ACT P... [more]
ACTG_BOVIN1.767e-1191.43Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 S... [more]
ACTG_ANSAN1.767e-1191.43Actin, cytoplasmic 2 OS=Anser anser anser GN=ACTG1... [more]
ACTF_STRPU1.767e-1191.43Actin, cytoskeletal 3B OS=Strongylocentrotus purpu... [more]
ACTE_STRPU1.767e-1191.43Actin, cytoskeletal 3A OS=Strongylocentrotus purpu... [more]
ACTD_STRPU1.767e-1191.43Actin, cytoskeletal 2B OS=Strongylocentrotus purpu... [more]
ACTC_STYPL1.767e-1191.43Actin, cytoplasmic OS=Styela plicata PE=3 SV=1[more]
ACTC_STRPU1.767e-1191.43Actin, cytoskeletal 2A OS=Strongylocentrotus purpu... [more]
ACTC_PISOC1.767e-1191.43Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664660 ID=EY664660; Name=EY664660; organism=Citrus sinensis; type=EST; length=622bp
CCACGCGTCCGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGAT
GTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACA
GGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTC
CATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACA
TGGAGAAGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTG
ATGTTATTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTA
CTCAACCGTCTTCCTTGCCTTGCATTCATCTGGTGTTCAACCAAGTCTTT
TTTCTTTTTTTTCCTTTTTTTTTTTTAAAGTAGGATGTTTGTAGCTGGAG
ATGAAGAGTGGTTGTGATGCTTTTCTATTTCATTTTCTAAATTTTCATAT
TTGAAGGTTTTTTTTCTCCCCCTCTCAAAAGGAACATTAATGTTAATAGC
TATTGTATGAGAAAACTTTAATTAGTGTCAGCTTGCAGTCATAAATTTGG
TTATTAAAATATATTTAATACTTGTTTGAGAGCTTTCAATGATGAATCAA
TGTCTTATTTCANNNAAAAAAA
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