EY664659

Overview
NameEY664659
Unique NameEY664659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.299e-15
Identity = 52/192 (27.08%), Postives = 93/192 (48.44%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELG----HSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVN----VTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAV--ELGQFGIRGNCLSP 680
            + GKVA +TG A GIG   A+    +GAKV + D   E G     ++ E      + ++ CDV ++  +++   + V   G+LDI+ NNAG+          N + ++E+ L +N    ++G +LG+ + ++       G I+                YC +KH ++  T++AA+  +L   G+R N + P
Sbjct:    3 VNGKVALVTGAAQGIGRAFAEGLLHKGAKVALVDWNLEAGVKCKAALDEEFEPQKTLFIQCDVADQEQLRDTFTKVVDYFGRLDILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSK-QHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: BDH2_HUMAN (3-hydroxybutyrate dehydrogenase type 2 OS=Homo sapiens GN=BDH2 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15
Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSIL-XXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            RL+GKV  +T  A GIG   A  FA++GAKV+  DI E     + +  G         DVT     K  IDQ      +LD++FN AG    +   ++D E+ D++  +++NV  ++L IK     M+  +SG+I+                 Y   K AV+ LTK+ A +  Q GIR NC+ P
Sbjct:    3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV---LDVTK----KKQIDQFANEVERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: HCD2_BOVIN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.215e-15
Identity = 59/199 (29.65%), Postives = 96/199 (48.24%), Query Frame = 3
Query:  114 LSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKA----DFERVLSVNVTGVFLGIKHAARVM------IPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            ++A  R ++G VA ITGGASG+G  TA+    QGA  V+ D+    G +  + +G S  ++   DVT+E  ++ A+       G++D+  N AGI   +KT  +   +A    DF+RV++VN+ G F  I+  A  M         + G I+                Y  +K  ++ +T   A +L   GIR   ++P
Sbjct:    1 MAAACRSVKGLVALITGGASGLGLATAERLVGQGATAVLLDLPNSDGETQAKKLGKS-CAFAPADVTSEKDVQAALTLAREKFGRVDVAVNCAGIAVASKTYNLKKSQAHTLEDFQRVINVNLIGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPMGIRVMTIAP 198          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 53/192 (27.60%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELG----HSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVN----VTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAV--ELGQFGIRGNCLSP 680
            + GKVA +TG A GIG   A+     GAKV + D   E G     ++ E      + +V CDV ++  +++   + V   G+LDI+ NNAG+          N + ++E+ L +N    ++G +LG+ + ++       G I+                YC +KH ++  T++AA+   L + G+R N + P
Sbjct:    3 VNGKVALVTGAAQGIGKAFAEALLLHGAKVALVDWNLEAGVKCKAALDEQFEPQKTLFVQCDVADQKQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEQTLQINLVSVISGTYLGLDYMSK-QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: PGDH_MACFA (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Macaca fascicularis GN=HPGD PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 52/192 (27.08%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELG----HSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVN----VTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAV--ELGQFGIRGNCLSP 680
            + GKVA +TG A GIG   A+    +GAKV + D   E G     ++ E      + ++ CDV ++  +++   + V   G+LDI+ NNAG+          N + ++E+ L +N    ++G +LG+ + ++       G I+                YC +KH ++  T++AA+   L   G+R N + P
Sbjct:    3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEKFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSK-QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: PGDH_HUMAN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Homo sapiens GN=HPGD PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 52/192 (27.08%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELG----HSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVN----VTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAV--ELGQFGIRGNCLSP 680
            + GKVA +TG A GIG   A+    +GAKV + D   E G     ++ E      + ++ CDV ++  +++   + V   G+LDI+ NNAG+          N + ++E+ L +N    ++G +LG+ + ++       G I+                YC +KH ++  T++AA+   L   G+R N + P
Sbjct:    3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSK-QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: HCD2_HUMAN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 3
Query:  114 LSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKA----DFERVLSVNVTGVFLGIKHAARVM------IPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            ++A  R ++G VA ITGGASG+G  TA+    QGA  V+ D+    G +  + +G +N  +   DVT+E  ++ A+       G++D+  N AGI   +KT  +   +     DF+RVL VN+ G F  I+  A  M         + G I+                Y  +K  ++ +T   A +L   GIR   ++P
Sbjct:    1 MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 57/185 (30.81%), Postives = 87/185 (47.03%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSN-SSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSI-LXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            +L GK A ITG   GIG   A+ FA+ GA +++ DI  E+     E  G  +  + V  DV + + +  AI +     G++DI+ NNAG+        + ++  DF   + +N+ GV+   K     MI  + G I +                Y   K A++ LTK+ AVE  Q GIR N + P
Sbjct:    3 KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFH--IDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICP 185          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 57/185 (30.81%), Postives = 87/185 (47.03%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSN-SSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSI-LXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            +L GK A ITG   GIG   A+ FA+ GA +++ DI  E+     E  G  +  + V  DV + + +  AI +     G++DI+ NNAG+        + ++  DF   + +N+ GV+   K     MI  + G I +                Y   K A++ LTK+ AVE  Q GIR N + P
Sbjct:    3 KLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFH--IDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICP 185          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 57/192 (29.69%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKT----RIIDNEKADFERVLSVNVTGVFLGIKHAARVM------IPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            ++  V+ +TGGASG+G  TA+  A+QGA V++AD+    G+ V + +G     +V  DVT+E  +  A+       G+LD+  N AG     KT    + + +   DF+RV+++N  G F  I+ +A +M         + G I+                Y  +K AV+ +T   A +L   GIR   ++P
Sbjct:    2 IKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELG-DKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAP 192          
The following BLAST results are available for this feature:
BLAST of EY664659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
PGDH_CAVPO1.299e-1527.0815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ca... [more]
BDH2_HUMAN1.696e-1533.153-hydroxybutyrate dehydrogenase type 2 OS=Homo sap... [more]
HCD2_BOVIN2.215e-1529.653-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taur... [more]
PGDH_MOUSE2.893e-1527.6015-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mu... [more]
PGDH_MACFA2.893e-1527.0815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ma... [more]
PGDH_HUMAN2.893e-1527.0815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ho... [more]
HCD2_HUMAN2.893e-1529.653-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sap... [more]
UCPA_ECOLI3.779e-1530.81Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO573.779e-1530.81Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
HCD2_DROME3.779e-1529.693-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664659 ID=EY664659; Name=EY664659; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGTTTTTCTATAATATAATACACGGGTGAGAAATCAACTCT
TTAGTTCCCTCTCTCTCTCTCTCTCTCTCTGACCCTCACTGCAAAATGGC
TAGCTCAGGGGTTCTTTCTGCAATCACCAGAAGGCTAGAGGGCAAGGTGG
CCTTTATTACCGGAGGGGCTAGTGGAATTGGTGCATGCACTGCAAAAGTC
TTTGCCCAACAGGGTGCCAAAGTTGTCATTGCGGATATTCAGGAAGAATT
AGGCCATTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCC
ATTGCGATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACC
GTTGCAACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGG
CGGCCCTAACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGC
GTGTCCTGAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCT
GCTCGTGTCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAG
CGTTAGCTCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAA
AACATGCTGTTTTAAGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAA
TTTGGGATTAGGGGGAATTGCTTGTCACCTTATGCTCTTGCACACCTTTT
GCTACCAGTTTTGTTGGGATTACCGATGAGGATCTAGAAGGTTTTATGAA
TTCAGCGGCTAACCCTTAGGGGGTGAACTTTAGGACCGAAAAAATTGCAT
ATGCACCTCCTTATCTACCGAGTGATGAGGCCAAAGTACGTGAGTGGACC
CATTCTTTCCTTGGCCGGAGGTTCACTATTGTCAATCCCTCCC
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