EY664659

Overview
NameEY664659
Unique NameEY664659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664659_ssr59 microsatellite EY664659_ssr59:59..80. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7947 contig Csv1_Contig7947:1..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15
Identity = 53/182 (29.12%), Postives = 88/182 (48.35%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            LEGKVA +TG + GIG   A++ A++GAKV+     E    ++ + +G  N   +  +VTN   I+  +       G +DI+ NNAGI   N   ++  ++ ++  ++  N+T +F   K   R M+  R G I+                Y  AK  V+  TK+ A E+   G+  N ++P
Sbjct:    3 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN--LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAP 181          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 59/182 (32.42%), Postives = 83/182 (45.60%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            L+ +V  ITGGA+GIG   A    + GA+V + D             G + +  V  DVT+E+ I  A+       G L  + NNAGI G       + E   + R+++VNVTG FL  K A   M+    G+I+                YC AK AV+ LT+  A +    GIR N + P
Sbjct:    2 LDAEVIAITGGAAGIGLAVAHAAIRAGARVALIDRDGACAQRAAAEFGAA-AWGVGADVTDEAAITAAMAGAQRALGPLTGLVNNAGIAGFGSVHATEVE--TWSRIMAVNVTGTFLASKAALFGMLERGRGAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCP 180          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            L GK + ITG +SGIG+  A++  + G+KV+I+   EE   S+  ++   N +   C++ N+    N I +T      LDI+  NAGI   + T  I  +  DF++V+ +N+   F+  + A + MI  R G I+                YC +K  ++ +TK+ + E+   GI  N ++P
Sbjct:    4 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNLANKEECSNLISKT----SNLDILVCNAGI--TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAP 178          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: BDH2_BOVIN (3-hydroxybutyrate dehydrogenase type 2 OS=Bos taurus GN=BDH2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.935e-15
Identity = 60/184 (32.61%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSIL-XXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            RL+GKV  +T  A GIG   A  FA++GAKV+  DI +     + +  G      +H  V + +  K  IDQ      +LD++FN AG    +   I+D E+ D++  +++NV  ++L IK     M+  +SG+I+                 Y   K AV+ LTK+ A +  Q GIR NC+ P
Sbjct:    3 RLDGKVIVLTAAAQGIGRAAALAFAKEGAKVIATDINDSKLQELDKYPG------IHTRVLDVTK-KKQIDQFANDIERLDVLFNVAGF--VHHGTILDCEETDWDFSMNLNVRSMYLMIKAFLPKMMAQKSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 51/182 (28.02%), Postives = 85/182 (46.70%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            L  K+A +TG  SGIG   A +  ++GAKVV+A   +E   +V   +   +   V  DVTN+  +   I     T G LDI+ N+A  G    ++I D +  +++ ++ VN+ G    ++ A   M+   SG ++                Y   K AV  +T+    EL + G++   +SP
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSA--GQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 51/182 (28.02%), Postives = 85/182 (46.70%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            L  K+A +TG  SGIG   A +  ++GAKVV+A   +E   +V   +   +   V  DVTN+  +   I     T G LDI+ N+A  G    ++I D +  +++ ++ VN+ G    ++ A   M+   SG ++                Y   K AV  +T+    EL + G++   +SP
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSA--GQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 62/204 (30.39%), Postives = 101/204 (49.51%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQE---ELGHSV------------VESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGG-PNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIP-----ARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            R+EG+VA ITG A G G   A   A++GA V++ D+     ++G+ +            VE++G   +  +H DV +   +   +D+ V+T G+LDI+  NAGI   P  +  I +    + +++ +N+TGV+    H A+V +P      R GSI+                Y  AKH V+ L ++ A+EL    +R N L P
Sbjct:    3 RVEGQVALITGAARGQGRSHAIKLAEEGADVILVDVPNDVVDIGYPLGTADELDQTAKDVENLG-RKAIVIHADVRDLESLTAEVDRAVSTLGRLDIVSANAGIASVPFLSHDIPDN--TWRQMIDINLTGVW----HTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHRVRVNSLHP 199          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 59/183 (32.24%), Postives = 84/183 (45.90%), Query Frame = 3
Query:  132 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVNVTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            + EGK+A +TGG SGIG  TA+ F  +GA V I   ++      V  IG  N + V  D++    +    D      GKLDI+F NAGIG       I  E+ D  R   +NV G    ++ A   + P + GSI+                Y  +K A+  L +N  ++L    IR N +SP
Sbjct:    3 KFEGKIALVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVNQIG-KNVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITEEQVD--RTFDINVKGTIFTVQKALS-LFPDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSP 181          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 52/192 (27.08%), Postives = 91/192 (47.40%), Query Frame = 3
Query:  135 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELG----HSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKADFERVLSVN----VTGVFLGIKHAARVMIPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAV--ELGQFGIRGNCLSP 680
            + GKVA +TG A GIG   A+    +GAKV + D   E G     ++ E      + ++ CDV ++  +++   + V   GKLDI+ NNAG+          N + ++E+ L +N    ++G +LG+ + ++       G  +                YC +KH ++  T++AA+   L   G+R N + P
Sbjct:    3 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVKCKAALDEQFEPQKTLFIQCDVADQEQLRDTFRKVVDHFGKLDILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSK-QNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICP 183          
BLAST of EY664659 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15
Identity = 59/199 (29.65%), Postives = 93/199 (46.73%), Query Frame = 3
Query:  114 LSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTRIIDNEKA----DFERVLSVNVTGVFLGIKHAARVM------IPARSGSILXXXXXXXXXXXXXXXXYCCAKHAVLRLTKNAAVELGQFGIRGNCLSP 680
            ++A  R ++G VA ITGGASG+G  TAK    QGA  V+ D+    G +  + +G  N  +   +VT+E  ++ A+       G++D+  N AGI    KT      +     DF+RV++VN+ G F  I+  A VM         + G I+                Y  +K  ++ +T   A +L   GIR   ++P
Sbjct:    1 MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 198          
The following BLAST results are available for this feature:
BLAST of EY664659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
FABG_VIBCH3.779e-1529.123-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
HCDS_XANP24.935e-1532.422-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG_RICPR4.935e-1529.673-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
BDH2_BOVIN4.935e-1532.613-hydroxybutyrate dehydrogenase type 2 OS=Bos taur... [more]
Y2403_STAAW6.446e-1528.02Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS6.446e-1528.02Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
LIMC_RHOER6.446e-1530.39(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
YKVO_BACSU8.419e-1532.24Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
PGDH_BOVIN8.419e-1527.0815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bo... [more]
HCD2_RAT8.419e-1529.653-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-A03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664659 ID=EY664659; Name=EY664659; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGTTTTTCTATAATATAATACACGGGTGAGAAATCAACTCT
TTAGTTCCCTCTCTCTCTCTCTCTCTCTCTGACCCTCACTGCAAAATGGC
TAGCTCAGGGGTTCTTTCTGCAATCACCAGAAGGCTAGAGGGCAAGGTGG
CCTTTATTACCGGAGGGGCTAGTGGAATTGGTGCATGCACTGCAAAAGTC
TTTGCCCAACAGGGTGCCAAAGTTGTCATTGCGGATATTCAGGAAGAATT
AGGCCATTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTCC
ATTGCGATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAACC
GTTGCAACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAGG
CGGCCCTAACAAGACCCGCATAATCGACAATGAAAAGGCCGATTTCGAGC
GTGTCCTGAGTGTAAATGTCACCGGAGTTTTCTTGGGCATCAAGCATGCT
GCTCGTGTCATGATTCCGGCTCGCAGTGGCAGCATTCTTTCAACTGCTAG
CGTTAGCTCAAGGGTTGGTGCTGCTGCCTCACATGCATACTGTTGTGCAA
AACATGCTGTTTTAAGACTCACCAAAAATGCTGCTGTTGAGCTAGGCCAA
TTTGGGATTAGGGGGAATTGCTTGTCACCTTATGCTCTTGCACACCTTTT
GCTACCAGTTTTGTTGGGATTACCGATGAGGATCTAGAAGGTTTTATGAA
TTCAGCGGCTAACCCTTAGGGGGTGAACTTTAGGACCGAAAAAATTGCAT
ATGCACCTCCTTATCTACCGAGTGATGAGGCCAAAGTACGTGAGTGGACC
CATTCTTTCCTTGGCCGGAGGTTCACTATTGTCAATCCCTCCC
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