CX672120

Overview
NameCX672120
Unique NameCX672120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_BORA1 (10 kDa chaperonin OS=Bordetella avium (strain 197N) GN=groS PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            L+PL+DRV +K  + E  TA G+++ +++ EKP  G V+AVGPG   E+G   P+ +  G+ V++ KYAG   K  DG   + +R  E++AV+
Sbjct:    3 LRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQGVK-VDGEELLVIREEEILAVI 94

HSP 2 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            +++PL DRV+VK    E KT  GI +P +A  KP  GEV+AVG GK     K L + +K G +V++ KYAG  ++ +G   L++RE++++ +++
Sbjct:    2 ALRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQGVKVDGEELLVIREEEILAVIQ 95
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_BRUO2 (10 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groS PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 2 
Query:  293 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +PL  RV+V+    E KT GGI +P  A+ KPQ GEVVA G G      KL  + VK G +V++ K++GTE++  G + LI++E D++GI+
Sbjct:    7 RPLHGRVIVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97

HSP 2 Score: 71.2478 bits (173), Expect = 8.664e-12
Identity = 31/92 (33.70%), Postives = 58/92 (63.04%), Query Frame = 2 
Query:  587 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +PL+ RV ++  E+E  TAGG+++ + +KEKP  G V+A G G  DE G   PL +  G+ V++ K++G + K   G + + ++ S+++ ++
Sbjct:    7 RPLHGRVIVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVK-IGGEDLLIMKESDILGIV 97
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH101_RHILO (10 kDa chaperonin 1 OS=Rhizobium loti GN=groS1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 2 
Query:  587 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +PL+DRV I+ AE +  + GG+++ + +KEKP  G VIAVGPG  DE G   PL +  G+ +++ K++G + K  DG + + ++ +++M V+
Sbjct:    4 RPLHDRVVIRRAEGDTKSKGGIIIPDNAKEKPQEGEVIAVGPGARDENGALVPLDVKAGDLILFGKWSGTEVK-IDGEDLLIMKEADIMGVI 94

HSP 2 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 35/92 (38.04%), Postives = 63/92 (68.48%), Query Frame = 2 
Query:  293 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            +PL DRV+++    + K+ GGI +P  A+ KPQ GEV+AVG G +    A + + VK G  +++ K++GTE++ +G + LI++E D++G+++
Sbjct:    4 RPLHDRVVIRRAEGDTKSKGGIIIPDNAKEKPQEGEVIAVGPGARDENGALVPLDVKAGDLILFGKWSGTEVKIDGEDLLIMKEADIMGVID 95
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_THEMA (10 kDa chaperonin OS=Thermotoga maritima GN=groS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 2 
Query:  296 PLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            PLG+R+L+K    E+KT+GGI LP +A+ KP   EVVAV  GK     K DI V  G +VIYSKYAGTE++ +  +++I+  +D++  +E
Sbjct:    6 PLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAV--GKIDDDEKFDIKV--GDKVIYSKYAGTEIKIDDEDYIIIDVNDILAKIE 91
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_RALEH (10 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 36/95 (37.89%), Postives = 61/95 (64.21%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            +L+PL+DRV +K  + E  TA G+++ + + EKP  G V+A+GPG  D++GN   L +  G+ V++ KYAG   K  +G   + +R  ++MAV++
Sbjct:    2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVK-VEGQELLVMREEDIMAVVN 95

HSP 2 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +++PL DRV+VK    E KT  GI +P  A  KP  GEV+A+G GK   K   + + VK G +V++ KYAG  ++  G   L++RE+D++ ++
Sbjct:    2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVKVEGQELLVMREEDIMAVV 94
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_POLNS (10 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            +++PL DRV++K    E KT  GI +P AA  KP  GEV+AVG GK     KL+   VK G +V++ KYAG  ++ +    +++REDD++ +++
Sbjct:    2 NLRPLHDRVIIKRLDQESKTASGIIIPDAAAEKPDQGEVLAVGPGKRDDGGKLNAPDVKVGDRVLFGKYAGQTVKVDSEELIVMREDDIMAVVQ 95

HSP 2 Score: 75.485 bits (184), Expect = 4.594e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +L+PL+DRV IK  + E  TA G+++ +A+ EKP  G V+AVGPG  D+ G      +  G+ V++ KYAG   K  D    I +R  ++MAV+
Sbjct:    2 NLRPLHDRVIIKRLDQESKTASGIIIPDAAAEKPDQGEVLAVGPGKRDDGGKLNAPDVKVGDRVLFGKYAGQTVK-VDSEELIVMREDDIMAVV 94
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10C_POPEU (20 kDa chaperonin (Fragments) OS=Populus euphratica PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 41/54 (75.93%), Postives = 43/54 (79.63%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKP 745
            +KPL DRV    AEAEE TAGGLLLTE +KEKPSIGTVIAVGPG LDEEG   P
Sbjct:    4 IKPLGDRV----AEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITP 53
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_XYLFT (10 kDa chaperonin OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=groS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 35/93 (37.63%), Postives = 62/93 (66.67%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    3 IKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_XYLFA (10 kDa chaperonin OS=Xylella fastidiosa GN=groS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 35/93 (37.63%), Postives = 62/93 (66.67%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    3 IKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_XYLF2 (10 kDa chaperonin OS=Xylella fastidiosa (strain M23) GN=groS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 35/93 (37.63%), Postives = 62/93 (66.67%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    3 IKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
The following BLAST results are available for this feature:
BLAST of CX672120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_BORA19.256e-1439.7810 kDa chaperonin OS=Bordetella avium (strain 197N... [more]
CH10_BRUO21.209e-1343.9610 kDa chaperonin OS=Brucella ovis (strain ATCC 25... [more]
CH101_RHILO1.209e-1338.0410 kDa chaperonin 1 OS=Rhizobium loti GN=groS1 PE=... [more]
CH10_THEMA1.579e-1346.6710 kDa chaperonin OS=Thermotoga maritima GN=groS P... [more]
CH10_RALEH1.579e-1337.8910 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]
CH10_POLNS1.579e-1340.4310 kDa chaperonin OS=Polynucleobacter necessarius ... [more]
CH10C_POPEU1.579e-1375.9320 kDa chaperonin (Fragments) OS=Populus euphratic... [more]
CH10_XYLFT2.062e-1341.9410 kDa chaperonin OS=Xylella fastidiosa (strain Te... [more]
CH10_XYLFA2.062e-1341.9410 kDa chaperonin OS=Xylella fastidiosa GN=groS PE... [more]
CH10_XYLF22.062e-1341.9410 kDa chaperonin OS=Xylella fastidiosa (strain M2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672120 ID=CX672120; Name=CX672120; organism=Citrus sinensis; type=EST; length=890bp
CTCGACTCTTCTTCAAATTTCAACTAGAAACCTTATCAAACTACTCGCTC
GCTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCTCTCTCTGCATC
TGCAAGCAGATGGCGACAGCTCAGCTAACAGCGTCATCAATTAAGGTTCC
AGCAAGGAGCTTGACTTCATTCGATGGTCTCAGACCGTCTTCCGTCAAGT
TCGCTTCCGTCGGAGGTGCTGCCAGCCAACGCTCTTTCCGTCGCTTGGTC
GTTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCAATTAAACCTTT
GGGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGAGAAAACTGATG
GTGGTATTTTTCTGCCATCTGCAGCTCAAACAAAGCCTCAAGCAGGTGAG
GTGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGGCTAAACTGGACAT
ATCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTATGCAGGGACTG
AGTTGGAGTTCAACGGCGCAAATCATCTCATAGTGAGGGAGGATGACGTA
GTTGGCATTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTAATGA
CAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGAGGTT
TGTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAACGGTCATT
GCTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGGAAACCTCTATC
CATTGCACCAGGGAACACGGTGATGTATTCGAAGTATGCAGGGAATGACT
TCAAGGGCAGTGATGGTACCAACTACATTGCTTTAAGAGCTTCTGAAGTG
ATGGCTGTGCTCTCTTAGTTGTCTGTGTTTACTTGAGCGA
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