CX672120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_PSEST (10 kDa chaperonin OS=Pseudomonas stutzeri GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G V+AVG G + + G + L++ G+ V++ Y+G++ DG + + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95 HSP 2 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_PSEU2 (10 kDa chaperonin OS=Pseudomonas syringae pv. syringae (strain B728a) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 33/93 (35.48%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G ++AVG G + + G + L++ G+ V++ Y+G++ DG + + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95 HSP 2 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_PSESM (10 kDa chaperonin OS=Pseudomonas syringae pv. tomato GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 33/93 (35.48%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G ++AVG G + + G + L++ G+ V++ Y+G++ DG + + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95 HSP 2 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_PSE14 (10 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 33/93 (35.48%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G ++AVG G + + G + L++ G+ V++ Y+G++ DG + + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95 HSP 2 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_METPP (10 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + ++ K G +V++ KY+G ++ +G L++RE+D+ ++E Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVE 95 HSP 2 Score: 70.0922 bits (170), Expect = 1.930e-11 Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 L+PL+DRV +K E E TA G+++ + + EKP G V+AVGPG +++G+ L+ G+ V++ KY+G K DG + +R ++ AV+ Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVK-VDGDELLVMREEDLFAVV 94
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_COLP3 (10 kDa chaperonin OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELE-FNGANHLIVREDDVVGILE 565 SI+PL DRV+VK K VE K+ GGI L +A K GEV+AVG G+ + ++ + VK G QVI+S+ G + E +G LI+ E D++ I+E Sbjct: 2 SIRPLHDRVIVKRKKVESKSAGGIVLTGSAAEKSTRGEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96 HSP 2 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 ++PL+DRV +K + E +AGG++LT ++ EK + G VIAVG G + E G +PL + G+ V++S+ G + DG + L S+++A++ Sbjct: 3 IRPLHDRVIVKRKKVESKSAGGIVLTGSAAEKSTRGEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIV 95
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_WOLPP (10 kDa chaperonin OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565 ++ L D VL IK + E+ GGI LPS+A+ KP GEV+A+G G + ++ ++VK G +V Y ++AGTE+E + +++++E D++ +++ Sbjct: 5 NLNVLDDNVL--IKPITEEKQGGIVLPSSAEKKPTKGEVIAIGSGSRNSSGERIALTVKTGDKVFYRQWAGTEVEHDNEKYVVMKESDLLAVIK 96
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_SHESW (10 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +++PL+DRV +K E E T+AGG++LT ++ EK + G ++AVG G + E G KPL + G+ V++++ G + DG + L +++MAV+ Sbjct: 2 NIRPLHDRVIVKRLEVESTSAGGIVLTGSAAEKSTRGEILAVGNGRILENGTVKPLDVKVGDVVIFNEGYGVKKEKIDGQEVLILSEADLMAVV 95
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_SHEPC (10 kDa chaperonin OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +++PL+DRV +K E E T+AGG++LT ++ EK + G ++AVG G + E G KPL + G+ V++++ G + DG + L +++MAV+ Sbjct: 2 NIRPLHDRVIVKRLEVESTSAGGIVLTGSAAEKSTRGEILAVGNGRILENGTVKPLDVKVGDVVIFNEGYGVKKEKIDGQEVLILSEADLMAVV 95
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_SHEB9 (10 kDa chaperonin OS=Shewanella baltica (strain OS195) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862 +++PL+DRV +K E E T+AGG++LT ++ EK + G ++AVG G + E G KPL + G+ V++++ G + DG + L +++MAV+ Sbjct: 2 NIRPLHDRVIVKRLEVESTSAGGIVLTGSAAEKSTRGEILAVGNGRILENGTVKPLDVKVGDVVIFNEGYGVKKEKIDGQEVLILSEADLMAVV 95 The following BLAST results are available for this feature:
BLAST of CX672120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672120 ID=CX672120; Name=CX672120; organism=Citrus sinensis; type=EST; length=890bpback to top |