CX672120

Overview
NameCX672120
Unique NameCX672120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11181 contig Csv1_Contig11181:15..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_MYCVP (10 kDa chaperonin OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL ++ G+ V+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++NG  +LI+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_MYCPA (10 kDa chaperonin OS=Mycobacterium paratuberculosis GN=groS PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  D++G  R PL ++ G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G  ++ + V  G  VIYSKY GTE+++NG  +LI+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_MYCGI (10 kDa chaperonin OS=Mycobacterium gilvum (strain PYR-GCK) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL ++ G+ V+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++NG  +LI+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_MYCAV (10 kDa chaperonin OS=Mycobacterium avium GN=groS PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  D++G  R PL ++ G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G  ++ + V  G  VIYSKY GTE+++NG  +LI+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_MYCA1 (10 kDa chaperonin OS=Mycobacterium avium (strain 104) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 865
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  D++G  R PL ++ G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 562
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G  ++ + V  G  VIYSKY GTE+++NG  +LI+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 2 
Query:  290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L+V   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94

HSP 2 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            LKPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 2 
Query:  290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L+V   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94

HSP 2 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            LKPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            SIKPLGDRV++K    EE T  GI +   A+ +PQ  EVVAVG G  +   + ++ VK G +V+YSKYAGTE++F G  + I+R+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94

HSP 2 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K  +G  Y  LR  +++A++
Sbjct:    3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 2 
Query:  290 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            I+PLGDRV++K    EE T  GI LPS+A+ KPQ  EVVAVG G  V   ++ + VK G +V +SKY+GTE++ +    LI+R+DD++GI+E
Sbjct:    3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94

HSP 2 Score: 72.7886 bits (177), Expect = 2.978e-12
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  584 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            ++PL DRV IK  EAEETT  G++L  ++KEKP +  V+AVGPG +  +G    + +  G+ V +SKY+G + K  D    + LR  +++ ++
Sbjct:    3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK-VDNEELLILRQDDILGIV 93
[Close]
BLAST of CX672120 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 2 
Query:  287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 565
            ++KPL DRV+VK    EEKT GG+ +P   + KPQ GEVVAVG GK     + L++ +K G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95

HSP 2 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 
Query:  581 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 862
            +LKPL DRV +K A AEE T GGL++ +  KEKP  G V+AVG G + + G    + I  G  V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
The following BLAST results are available for this feature:
BLAST of CX672120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_MYCVP7.317e-1946.8810 kDa chaperonin OS=Mycobacterium vanbaalenii (st... [more]
CH10_MYCPA7.317e-1947.9210 kDa chaperonin OS=Mycobacterium paratuberculosi... [more]
CH10_MYCGI7.317e-1946.8810 kDa chaperonin OS=Mycobacterium gilvum (strain ... [more]
CH10_MYCAV7.317e-1947.9210 kDa chaperonin OS=Mycobacterium avium GN=groS P... [more]
CH10_MYCA17.317e-1947.9210 kDa chaperonin OS=Mycobacterium avium (strain 1... [more]
CH10_LACRJ7.317e-1951.6110 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_LACRD7.317e-1951.6110 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_CLOPS7.317e-1948.3910 kDa chaperonin OS=Clostridium perfringens (stra... [more]
CH10_CLOAB7.317e-1950.0010 kDa chaperonin OS=Clostridium acetobutylicum GN... [more]
CH10_CHLPD7.317e-1947.8710 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672120 ID=CX672120; Name=CX672120; organism=Citrus sinensis; type=EST; length=890bp
CTCGACTCTTCTTCAAATTTCAACTAGAAACCTTATCAAACTACTCGCTC
GCTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCTCTCTCTGCATC
TGCAAGCAGATGGCGACAGCTCAGCTAACAGCGTCATCAATTAAGGTTCC
AGCAAGGAGCTTGACTTCATTCGATGGTCTCAGACCGTCTTCCGTCAAGT
TCGCTTCCGTCGGAGGTGCTGCCAGCCAACGCTCTTTCCGTCGCTTGGTC
GTTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCAATTAAACCTTT
GGGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGAGAAAACTGATG
GTGGTATTTTTCTGCCATCTGCAGCTCAAACAAAGCCTCAAGCAGGTGAG
GTGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGGCTAAACTGGACAT
ATCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTATGCAGGGACTG
AGTTGGAGTTCAACGGCGCAAATCATCTCATAGTGAGGGAGGATGACGTA
GTTGGCATTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTAATGA
CAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGAGGTT
TGTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAACGGTCATT
GCTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGGAAACCTCTATC
CATTGCACCAGGGAACACGGTGATGTATTCGAAGTATGCAGGGAATGACT
TCAAGGGCAGTGATGGTACCAACTACATTGCTTTAAGAGCTTCTGAAGTG
ATGGCTGTGCTCTCTTAGTTGTCTGTGTTTACTTGAGCGA
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