CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G H ++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 39/94 (41.49%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = -2 Query: 446 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 748 A VA +++KPLGDRVLVKI +EKT GGIFLP A+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ + ++ E D++ I++ Sbjct: 2 AAVALNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ L +++A++ Sbjct: 8 VSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPL DRVLVK EEKT GG+F+P A+ KP GEVVA G GK KL ++VK G V++SKYAGTE++ +G H ++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95 HSP 2 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG + E+G +++ G+TV++SKYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK-LDGVEHLVMREDDILAII 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVV 102 HSP 2 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ + ++ E D++ ++ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20 Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 155 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMA 436 + KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G +Y+ L +++A Sbjct: 8 VSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILA 100 HSP 2 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = -2 Query: 458 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 748 A ++ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVVAVG GK ++ I VK G +V+YSKYAGT+++ G ++ ++ E D++ Sbjct: 2 AAISINVSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDIL 99
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPLGDRV++K +EEKT GI +P A+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G + I++E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ L+ +++AV+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPLGDRV++K +EEKT GI +P A+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G + I++E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ L+ +++AV+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20 Identity = 46/94 (48.94%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPL DRVLVK EEKT GG+++P A+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++ +G +H ++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95 HSP 2 Score: 88.5817 bits (218), Expect = 4.025e-17 Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPLNDRV +K E+EE TAGGL + + +KEKPS G VIAVGPG ++G +++ G+ V+++KYAG + K DG +++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK-LDGVDHLVMREDDILAII 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G + ++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 80.1073 bits (196), Expect = 1.432e-14 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +KV ++EE T GG++L +KEKP G V+AVGPG +G R + G+ V++SKYAG + K DG Y+ LR +++A++ Sbjct: 4 KPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = -2 Query: 446 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 748 A V +++KPLGDRVLVKI +EKT GGIFLP A+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ + ++ E D++ I++ Sbjct: 2 AAVTLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 92.8189 bits (229), Expect = 2.134e-18 Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = -2 Query: 149 TDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 445 T + KPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ L +++A++ Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |