CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            ++KPL DRV+VK    EEKT GG+++P   + KPQ GEVVAVG GK     + L++ V  G +V+Y KY+GTE+   G ++ I+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95          

HSP 2 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +A GN V+Y KY+G +    +G +Y+ +R  ++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEV-AVEGEDYLIMRESDIFAIL 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH101_RHOBA (10 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groS1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -2
Query:  155 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMA 430
            + +PL+DRV ++ +EAEETTAGG++L +++KEKP  GTV+AVGPG L + GNR  LS++ G+ V+Y KY G++ +  DG     LR  +++A
Sbjct:    8 NLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIE-VDGHEMKILRESDILA 98          

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  458 KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 733
            K  +++PL DRV+V+    EE T GGI LP +A+ KPQ G VVAVG GK +    + ++SV  G  VIY KY G+E+E +G    I+RE D++
Sbjct:    5 KKINLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIEVDGHEMKILRESDIL 97          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KPLGDRV++K +T EEKT GGI L    + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG    +V   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94          

HSP 2 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    3 KPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KPLGDRV++K +T EEKT GGI L    + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG    +V   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94          

HSP 2 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV +K    EE T GG++L    KEKP+ G VIAVG G   E G +   ++  G+ V++ KYAGN+ +  +G  ++ + A +++A++
Sbjct:    3 KPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CYAPA (10 kDa chaperonin, cyanelle OS=Cyanophora paradoxa GN=groS-A PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = -2
Query:  149 TDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 445
            T  +K  +PL +RV +KV+++EE TAGG+LL +  KEKP IG +IA GPG  +++G+ +PL +   + V+YSKYAG D K  +   Y+ L   +++A++
Sbjct:    5 TLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIK-LENEEYVLLSEKDILAII 102          

HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = -2
Query:  449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748
            A V     +++PLG+RVLVK+   EEKT GGI LP   + KPQ GE++A G G+         + V   ++V+YSKYAGT+++     + ++ E D++ I+
Sbjct:    2 ATVTLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIKLENEEYVLLSEKDILAII 102          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CORK4 (10 kDa chaperonin OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ +++ EAE TTA GL++ + +KEKP   TV+AVGPG  DE G R P+ +A G+ V++SKY G + K + G  Y+ L   +V+AV+
Sbjct:    5 NIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYA-GEEYLILSQRDVLAVV 97          

HSP 2 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +IKPL D++LV+I   E  T  G+ +P  A+ KPQ   VVAVG G+T    K + + V  G  VI+SKY GTE+++ G  + I+ + DV+ ++E
Sbjct:    5 NIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYAGEEYLILSQRDVLAVVE 98          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            I+PLGDRV++K    EE T  GI LP +A+ KPQ  EVVAVG G  V   ++ + VK G +V +SKY+GTE++ +     I+R+DD++GI+E
Sbjct:    3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94          

HSP 2 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL DRV IK  EAEETT  G++L  ++KEKP +  V+AVGPG +  +G    + +  G+ V +SKY+G + K  D    + LR  +++ ++
Sbjct:    4 RPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK-VDNEELLILRQDDILGIV 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -2
Query:  449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721
            IKPLGDRV+++I   EEKT  GI LP  A+ KPQ G+VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  + I+RE D++ ++
Sbjct:    2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV I++ E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+ LR  +++AV+
Sbjct:    3 KPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = -2
Query:  449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721
            +KPLGDR++++    EEKT  GI LP +A+ KPQ G+VVAVG G+ T    K+ + VK G  +I+SKYAGTE+++ G  + I+RE DV+ I+
Sbjct:    2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93          

HSP 2 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 38/92 (41.30%), Postives = 64/92 (69.57%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ I+  ++EE TA G++L +++KEKP  G V+AVG G + + G +  L +  G+++++SKYAG + K  +GT Y+ LR  +V+A++
Sbjct:    3 KPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK-YEGTEYLILRESDVLAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = -2
Query:  449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G+VVA G G+ +    ++ + VK G ++I+SKYAGTE+++ G ++ I+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 41/92 (44.57%), Postives = 64/92 (69.57%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV I++ E+EE TA G++L +++KEKP  G V+A G G + E G R  L +  G+ +++SKYAG + K  +GT+Y+ LR  +++AV+
Sbjct:    3 KPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_CHLPB6.210e-1846.8110 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH101_RHOBA6.210e-1847.8310 kDa chaperonin 1 OS=Rhodopirellula baltica GN=g... [more]
CH10_LACRJ8.110e-1849.4610 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_LACRD8.110e-1849.4610 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_CYAPA8.110e-1842.4210 kDa chaperonin, cyanelle OS=Cyanophora paradoxa... [more]
CH10_CORK48.110e-1844.6810 kDa chaperonin OS=Corynebacterium kroppenstedti... [more]
CH10_CLOAB8.110e-1847.8310 kDa chaperonin OS=Clostridium acetobutylicum GN... [more]
CH10_BACTR8.110e-1846.7410 kDa chaperonin OS=Bacillus thermoglucosidasius ... [more]
CH10_BACSK8.110e-1848.9110 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH10_BACLD8.110e-1844.5710 kDa chaperonin OS=Bacillus licheniformis (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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