CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 ++KPL DRV+VK EEKT GG+++P + KPQ GEVVAVG GK + L++ V G +V+Y KY+GTE+ G ++ I+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 81.6481 bits (200), Expect = 4.920e-15 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + +A GN V+Y KY+G + +G +Y+ +R ++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEV-AVEGEDYLIMRESDIFAIL 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH101_RHOBA (10 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groS1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 44/92 (47.83%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 155 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMA 430 + +PL+DRV ++ +EAEETTAGG++L +++KEKP GTV+AVGPG L + GNR LS++ G+ V+Y KY G++ + DG LR +++A Sbjct: 8 NLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIE-VDGHEMKILRESDILA 98 HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = -2 Query: 458 KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 733 K +++PL DRV+V+ EE T GGI LP +A+ KPQ G VVAVG GK + + ++SV G VIY KY G+E+E +G I+RE D++ Sbjct: 5 KKINLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIEVDGHEMKILRESDIL 97
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV++K +T EEKT GGI L + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG +V D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94 HSP 2 Score: 72.0182 bits (175), Expect = 3.899e-12 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +K EE T GG++L KEKP+ G VIAVG G E G + ++ G+ V++ KYAGN+ + +G ++ + A +++A++ Sbjct: 3 KPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 +KPLGDRV++K +T EEKT GGI L + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG +V D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94 HSP 2 Score: 72.0182 bits (175), Expect = 3.899e-12 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV +K EE T GG++L KEKP+ G VIAVG G E G + ++ G+ V++ KYAGN+ + +G ++ + A +++A++ Sbjct: 3 KPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CYAPA (10 kDa chaperonin, cyanelle OS=Cyanophora paradoxa GN=groS-A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = -2 Query: 149 TDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 445 T +K +PL +RV +KV+++EE TAGG+LL + KEKP IG +IA GPG +++G+ +PL + + V+YSKYAG D K + Y+ L +++A++ Sbjct: 5 TLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIK-LENEEYVLLSEKDILAII 102 HSP 2 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V +++PLG+RVLVK+ EEKT GGI LP + KPQ GE++A G G+ + V ++V+YSKYAGT+++ + ++ E D++ I+ Sbjct: 2 ATVTLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIKLENEEYVLLSEKDILAII 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CORK4 (10 kDa chaperonin OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL D++ +++ EAE TTA GL++ + +KEKP TV+AVGPG DE G R P+ +A G+ V++SKY G + K + G Y+ L +V+AV+ Sbjct: 5 NIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYA-GEEYLILSQRDVLAVV 97 HSP 2 Score: 74.7146 bits (182), Expect = 6.015e-13 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 +IKPL D++LV+I E T G+ +P A+ KPQ VVAVG G+T K + + V G VI+SKY GTE+++ G + I+ + DV+ ++E Sbjct: 5 NIKPLEDKLLVQIVEAETTTASGLVIPDTAKEKPQEATVVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYAGEEYLILSQRDVLAVVE 98
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 I+PLGDRV++K EE T GI LP +A+ KPQ EVVAVG G V ++ + VK G +V +SKY+GTE++ + I+R+DD++GI+E Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94 HSP 2 Score: 70.8626 bits (172), Expect = 8.685e-12 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 +PL DRV IK EAEETT G++L ++KEKP + V+AVGPG + +G + + G+ V +SKY+G + K D + LR +++ ++ Sbjct: 4 RPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK-VDNEELLILRQDDILGIV 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721 IKPLGDRV+++I EEKT GI LP A+ KPQ G+VVAVG+G+ + ++ V+ G ++I+SKYAGTE++++G + I+RE D++ ++ Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93 HSP 2 Score: 82.0333 bits (201), Expect = 3.767e-15 Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV I++ E EE TA G++L + +KEKP G V+AVG G + + G R + G+ +++SKYAG + K DG Y+ LR +++AV+ Sbjct: 3 KPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = -2 Query: 449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721 +KPLGDR++++ EEKT GI LP +A+ KPQ G+VVAVG G+ T K+ + VK G +I+SKYAGTE+++ G + I+RE DV+ I+ Sbjct: 2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93 HSP 2 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 38/92 (41.30%), Postives = 64/92 (69.57%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DR+ I+ ++EE TA G++L +++KEKP G V+AVG G + + G + L + G+++++SKYAG + K +GT Y+ LR +V+A++ Sbjct: 3 KPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK-YEGTEYLILRESDVLAII 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721 +KPLGDRV++++ EEKT GI LP +A+ KPQ G+VVA G G+ + ++ + VK G ++I+SKYAGTE+++ G ++ I+RE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 HSP 2 Score: 85.8853 bits (211), Expect = 2.609e-16 Identity = 41/92 (44.57%), Postives = 64/92 (69.57%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV I++ E+EE TA G++L +++KEKP G V+A G G + E G R L + G+ +++SKYAG + K +GT+Y+ LR +++AV+ Sbjct: 3 KPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |