CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 85.8853 bits (211), Expect = 2.609e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.080e-20 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 85.8853 bits (211), Expect = 2.609e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20 Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K GSD Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSD--EYVLLSEKDILAVV 102 HSP 2 Score: 85.1149 bits (209), Expect = 4.450e-16 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK V G V+YSKYAGT+++ + ++ E D++ ++ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20 Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL +++KEKP IG V+AVG G +++G+R + + G+ V+YSKYAG D K S G +Y+ L +++A + Sbjct: 8 VSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLS-GDDYVLLSEKDILATV 102 HSP 2 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = -2 Query: 458 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 748 A ++ +++KPLGDRV VK+ EEKT GGI LP +A+ KPQ GEVVAVGEGK ++ + VK G +V+YSKYAGT+++ +G ++ ++ E D++ Sbjct: 2 AAISINVSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLSGDDYVLLSEKDIL 99
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ L +++A++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAIV 102 HSP 2 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 45/101 (44.55%), Postives = 64/101 (63.37%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ + ++ E D++ I+ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVV 102 HSP 2 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ + ++ E D++ ++ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V VGPG +E+G+R+ ++ G+ V+YSKYAG D K GSD Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVV 102 HSP 2 Score: 85.5001 bits (210), Expect = 3.407e-16 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ + ++ E D++ ++ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRVF+KV+ +EE TAGG+ L +A+KEKP IG V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G ++ L +++A + Sbjct: 12 KPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIK-LGGEEFVLLSEKDILAAV 102 HSP 2 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = -2 Query: 458 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 748 A V+ T++KPLGDRV VK+ EEKT GGIFLP AA+ KPQ GEVVAVG GK ++ + V G +V+YSKYAGT+++ G ++ E D++ Sbjct: 2 AAVSINVTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDIL 99
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLAM3 (10 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groS PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20 Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DR+ I+ EAE+TTA GL++ + +KEKP G V+AVGPG +D+ GNR PL +A G+ V+YSKY G + K DG + + L A +V+AV+ Sbjct: 6 KPLEDRIVIQQVEAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAVGDKVIYSKYGGTEVK-YDGQDLLVLSARDVLAVI 96 HSP 2 Score: 77.411 bits (189), Expect = 9.279e-14 Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK---TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 SIKPL DR++++ E+ T G+ +P A+ KPQ GEVVAVG G+ + LD++V G +VIYSKY GTE++++G + ++ DV+ ++E Sbjct: 4 SIKPLEDRIVIQQVEAEQTTASGLVIPDTAKEKPQEGEVVAVGPGRIDDNGNRVPLDVAV--GDKVIYSKYGGTEVKYDGQDLLVLSARDVLAVIE 97
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19 Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+E+G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |