CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 149 PLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 421 PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV+ Sbjct: 13 PLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVV 102 HSP 2 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK VK G +V+YSKYAGT+++ ++ ++ E D++ ++ Sbjct: 2 AAVSLSVSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROM0 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9301) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G + ++ E D++ ++ Sbjct: 2 AAVSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19 Identity = 43/99 (43.43%), Postives = 68/99 (68.69%), Query Frame = -2 Query: 149 TDEIKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 445 T + KPL +RVF+KV+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K G Y+ L +++A++ Sbjct: 5 TLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK-LGGDEYVLLAEKDILAIV 102 HSP 2 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ GEVV+ G GK + ++ VK G +V+YSKYAGT+++ G + ++ E D++ I+ Sbjct: 2 AAVTLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAEKDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNPX (10 kDa chaperonin OS=Synechococcus sp. (strain WH8102) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19 Identity = 44/96 (45.83%), Postives = 67/96 (69.79%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DRVFIKV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K G ++ L +++A++ Sbjct: 8 VSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIK-LGGDEFVLLTEKDILAIV 102 HSP 2 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV +K+ EEKT GGI LP A+ KPQ GEVV VG GK V G +V+YSKYAGT+++ G ++ E D++ I+ Sbjct: 2 AAVSLSVSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLGGDEFVLLTEKDILAIV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19 Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 436 + KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K S Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLST-DEYVLLSEKDILAVV 102 HSP 2 Score: 85.1149 bits (209), Expect = 4.450e-16 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A V+ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK V G +V+YSKYAGT+++ + + ++ E D++ ++ Sbjct: 2 AAVSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_NOSP7 (10 kDa chaperonin OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19 Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = -2 Query: 149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436 + KPL+DRVF+KV +EE TAGGL L + +KEKP +G V+A+GPG +E+G+R+ L I G+ V+YSKYAG D K G++ Y+ L +++AV+ Sbjct: 8 VSTVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAVV 102 HSP 2 Score: 88.9669 bits (219), Expect = 3.082e-17 Identity = 41/101 (40.59%), Postives = 68/101 (67.33%), Query Frame = -2 Query: 449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748 A ++ +++KPL DRV VK+ EEKT GG++LP A+ KPQ GEVVA+G GK ++ ++ +K G +V+YSKYAGT+++ + ++ E D++ ++ Sbjct: 2 AALSLSVSTVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAVV 102
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 155 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMA 436 + KPL DRVF+KV+ AEE TAGG+LL + +KEKP IG V+ VGPG +++G P+ + G+ V+YSKYAG D K G +Y+ L +++A Sbjct: 8 VSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIK-LGGDDYVLLTEKDILA 100 HSP 2 Score: 90.1225 bits (222), Expect = 1.383e-17 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = -2 Query: 458 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVV 748 A ++ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK + VK G +V+YSKYAGT+++ G ++ ++ E D++ Sbjct: 2 AAISINVSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDIL 99
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_NOCSJ (10 kDa chaperonin OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19 Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL DR+ +K +AE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR PL + G+ V+YSKY G + K + G Y+ L A +V+AV+ Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTVGDKVIYSKYGGTEVKYA-GEEYLILSARDVLAVV 96 HSP 2 Score: 75.0998 bits (183), Expect = 4.605e-13 Identity = 39/95 (41.05%), Postives = 61/95 (64.21%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK---TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPL DR++VK E+ T G+ +P A+ KPQ GEV+A+G G+ + LD++V G +VIYSKY GTE+++ G + I+ DV+ ++ Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTV--GDKVIYSKYGGTEVKYAGEEYLILSARDVLAVV 96 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |