CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_XYLFT (10 kDa chaperonin OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    4 KPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_XYLFA (10 kDa chaperonin OS=Xylella fastidiosa GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    4 KPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_XYLF2 (10 kDa chaperonin OS=Xylella fastidiosa (strain M23) GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            SIKPL DR++VK    +E + GGI +P +A+ K   GEV+AVG GK +    +    VK G +VIY +YAG+  +  G  + ++REDD++ I+
Sbjct:    2 SIKPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYKAEGVEYKVLREDDILAII 94

HSP 2 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL+DR+ +K  EA+E + GG+++ +++KEK + G VIAVG G   + GN +   +  G  V+Y +YAG+ +K ++G  Y  LR  +++A++
Sbjct:    4 KPLHDRIVVKPIEADEVSPGGIVIPDSAKEKSTKGEVIAVGAGKPLDNGNVRTPCVKVGEKVIYGQYAGSTYK-AEGVEYKVLREDDILAII 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEMA (10 kDa chaperonin OS=Thermotoga maritima GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = -2 
Query:  446 PLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 715
            PLG+R+L+K    E+KT+GGI LP +A+ KP   EVVAV  GK     K DI V  G +VIYSKYAGTE++ +  ++ I+  +D++  +E
Sbjct:    6 PLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAV--GKIDDDEKFDIKV--GDKVIYSKYAGTEIKIDDEDYIIIDVNDILAKIE 91
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_POLNS (10 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = -2 
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +++PL DRV++K    E KT  GI +P AA  KP  GEV+AVG GK     KL+   VK G +V++ KYAG  ++ +     ++REDD++ +++
Sbjct:    2 NLRPLHDRVIIKRLDQESKTASGIIIPDAAAEKPDQGEVLAVGPGKRDDGGKLNAPDVKVGDRVLFGKYAGQTVKVDSEELIVMREDDIMAVVQ 95

HSP 2 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV IK  + E  TA G+++ +A+ EKP  G V+AVGPG  D+ G      +  G+ V++ KYAG   K  D    I +R  ++MAV+
Sbjct:    2 NLRPLHDRVIIKRLDQESKTASGIIIPDAAAEKPDQGEVLAVGPGKRDDGGKLNAPDVKVGDRVLFGKYAGQTVK-VDSEELIVMREDDIMAVV 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BURVI (10 kDa chaperonin OS=Burkholderia vietnamiensis GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +++PL DRV+VK    E KT  GI +P AA  KP  GEV+A+G GK   K A + + VK G +V++ KYAG  ++ +G    ++RE+D++ ++
Sbjct:    2 NLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAIGPGKRDDKGALIALDVKVGDRVLFGKYAGQTVKVDGQELLVMREEDIMAVV 94

HSP 2 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 36/94 (38.30%), Postives = 59/94 (62.77%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV +K  + E  TA G+++ +A+ EKP  G V+A+GPG  D++G    L +  G+ V++ KYAG   K  DG   + +R  ++MAV+
Sbjct:    2 NLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAIGPGKRDDKGALIALDVKVGDRVLFGKYAGQTVK-VDGQELLVMREEDIMAVV 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BORA1 (10 kDa chaperonin OS=Bordetella avium (strain 197N) GN=groS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13
Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV +K  + E  TA G+++ +++ EKP  G V+AVGPG   E+G   P+ +  G+ V++ KYAG   K  DG   + +R  E++AV+
Sbjct:    4 RPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQGVK-VDGEELLVIREEEILAVI 94

HSP 2 Score: 74.3294 bits (181), Expect = 7.855e-13
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = -2 
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +++PL DRV+VK    E KT  GI +P +A  KP  GEV+AVG GK     K L + +K G +V++ KYAG  ++ +G    ++RE++++ +++
Sbjct:    2 ALRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQGVKVDGEELLVIREEEILAVIQ 95
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THENE (10 kDa chaperonin OS=Thermotoga neapolitana GN=groS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = -2 
Query:  446 PLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 715
            PLG+R+L+K    E+KT+GGI LP +A+ KP   EVVAV  GK   + K DI V  G +VI+SKYAGTE++ +  ++ I+  +D++  +E
Sbjct:    6 PLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAV--GKIEDEEKFDIKV--GDKVIFSKYAGTEIKIDDEDYIIIDVNDILAKIE 91
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLCV (10 kDa chaperonin OS=Chlamydophila caviae GN=groS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ +K  E + T  GG++L + +K+K     V+ +G G  D++GN  P  +  G+TV+  KYAG +    DG  Y+ ++  EVMAVL
Sbjct:   11 KPLGDRILVKREEEDSTARGGIILPDTAKKKQDRAEVLVLGTGKRDKDGNVLPFEVTVGDTVLIDKYAGQELT-VDGEEYVIVQESEVMAVL 101

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = -2 
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            IKPLGDR+LVK +  +    GGI LP  A+ K    EV+ +G GK       L   V  G  V+  KYAG EL  +G  + IV+E +V+ +L+
Sbjct:   10 IKPLGDRILVKREEEDSTARGGIILPDTAKKKQDRAEVLVLGTGKRDKDGNVLPFEVTVGDTVLIDKYAGQELTVDGEEYVIVQESEVMAVLK 102
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_BRUO2 (10 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=groS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = -2 
Query:  449 KPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 718
            +PL  RV+V+    E KT GGI +P  A+ KPQ GEVVA G G      KL  + VK G +V++ K++GTE++  G +  I++E D++GI+
Sbjct:    7 RPLHGRVIVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97

HSP 2 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 31/93 (33.33%), Postives = 58/93 (62.37%), Query Frame = -2 
Query:  149 FKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 427
            F+PL+ RV ++  E+E  TAGG+++ + +KEKP  G V+A G G  DE G   PL +  G+ V++ K++G + K   G + + ++  +++ ++
Sbjct:    6 FRPLHGRVIVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVK-IGGEDLLIMKESDILGIV 97
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_XYLFT4.605e-1341.9410 kDa chaperonin OS=Xylella fastidiosa (strain Te... [more]
CH10_XYLFA4.605e-1341.9410 kDa chaperonin OS=Xylella fastidiosa GN=groS PE... [more]
CH10_XYLF24.605e-1341.9410 kDa chaperonin OS=Xylella fastidiosa (strain M2... [more]
CH10_THEMA4.605e-1346.6710 kDa chaperonin OS=Thermotoga maritima GN=groS P... [more]
CH10_POLNS4.605e-1340.4310 kDa chaperonin OS=Polynucleobacter necessarius ... [more]
CH10_BURVI4.605e-1340.8610 kDa chaperonin OS=Burkholderia vietnamiensis GN... [more]
CH10_BORA14.605e-1339.1310 kDa chaperonin OS=Bordetella avium (strain 197N... [more]
CH10_THENE6.015e-1345.5610 kDa chaperonin OS=Thermotoga neapolitana GN=gro... [more]
CH10_CHLCV6.015e-1339.1310 kDa chaperonin OS=Chlamydophila caviae GN=groS ... [more]
CH10_BRUO26.015e-1342.8610 kDa chaperonin OS=Brucella ovis (strain ATCC 25... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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