CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAS1 (10 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 63/92 (68.48%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL +RV I+ +E E+TT  G++LT+++KEK + GT+IAVG G + ++G+R    +  G+ V++ +YAG + K  D T Y+ +   +++A++
Sbjct:    3 KPLGNRVIIQKSEQEQTTKSGIVLTDSAKEKSNEGTIIAVGAGRILKDGSRVAPEVNEGDKVVFQQYAGTEVKRGDET-YLIVNEEDILAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAES (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL +RV I+  E E+TT  G++LT+++KEK + G +IAVG G L + G +    ++ G+T+++ +YAG + K  D T Y+ L   +++A++
Sbjct:    3 KPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKT-YLILNEEDILAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAEQ (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL +RV I+  E E+TT  G++LT+++KEK + G +IAVG G L + G +    ++ G+T+++ +YAG + K  D T Y+ L   +++A++
Sbjct:    3 KPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKT-YLILNEEDILAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RALEH (10 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 35/94 (37.23%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV +K  + E  TA G+++ + + EKP  G V+A+GPG  D++GN   L +  G+ V++ KYAG   K  +G   + +R  ++MAV+
Sbjct:    2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVK-VEGQELLVMREEDIMAVV 94          

HSP 2 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = -2
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +++PL DRV+VK    E KT  GI +P  A  KP  GEV+A+G GK   K   + + VK G +V++ KYAG  ++  G    ++RE+D++ ++
Sbjct:    2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVKVEGQELLVMREEDIMAVV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_KOSOT (10 kDa chaperonin OS=Kosmotoga olearia (strain TBF 19.5.1) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = -2
Query:  446 PLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 715
            PLG+R+L+K    E++T+GGI LP  A+ KP   EV+ +G      K   DI +K G +VI+SKYAGTE++ +  ++ ++ +DD++  +E
Sbjct:    5 PLGERLLIKPIKEEKRTEGGIVLPDTAKEKPMKAEVIEIG------KDVEDIDIKVGDKVIFSKYAGTEIKIDDEDYILIDQDDILAKVE 88          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_ANASL (10 kDa chaperonin OS=Anabaena sp. (strain L31) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = -2
Query:  449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748
            A V+   +++KPLGDRV VK+ +  EK    ++ P  A+ KPQ GEVVA+G GK     ++ ++ VK G  ++YSKYAGT+++     + ++ E D++ ++
Sbjct:    2 AAVSLSVSTVKPLGDRVFVKV-SASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTEEYVLLSEKDILAMV 101          

HSP 2 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = -2
Query:  149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436
            +   KPL DRVF+KV+ A E     L   + +KEKP +G V+A+G G  +++G+R+ L +  G+ ++YSKYAG D K G++   Y+ L   +++A++
Sbjct:    8 VSTVKPLGDRVFVKVS-ASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTE--EYVLLSEKDILAMV 101          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_AMOPS (10 kDa chaperonin OS=Amoeba proteus symbiotic bacterium GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            I+PL DRV+V+    E  T G I +P +A  KP  GE++A+G GK +    +    VK G  V++ KY+GTE++  G    ++REDD++G++E
Sbjct:    3 IRPLHDRVVVRRLEEERTTAGWIVIPDSATEKPMRGEIIAIGAGKILDNGDVRAFVVKVGDVVLFGKYSGTEVKVAGQELVVMREDDIMGVIE 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_ALCBS (10 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 36/92 (39.13%), Postives = 61/92 (66.30%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV ++  E E  +AGG++L  ++ EKPS G VIAVG G + E G+ +PL +  G+TV++ +Y+G+  K  +G   + +   E++AV+
Sbjct:    4 RPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVK-VEGEELLIMSEAEILAVV 94          

HSP 2 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            SI+PL DRVLV+ +  E K+ GGI LP +A  KP  GEV+AVG GK      +  + VK G  VI+ +Y+G+ ++  G    I+ E +++ ++E
Sbjct:    2 SIRPLHDRVLVRREEEETKSAGGIVLPGSAAEKPSRGEVIAVGNGKITENGDVRPLDVKAGDTVIFGQYSGSTVKVEGEELLIMSEAEILAVVE 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEMY (10 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groS PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.340e-12
Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + E G  +PL++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNQGEVVAVGTGKVLENGEVRPLAVKVGDKVVFGPYSGSNTVKVDGEDLLVMGENEILAVI 95          

HSP 2 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG GK +   ++  ++VK G +V++  Y+G+  ++ +G +  ++ E++++ ++E
Sbjct:    3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNQGEVVAVGTGKVLENGEVRPLAVKVGDKVVFGPYSGSNTVKVDGEDLLVMGENEILAVIE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_VESOH (10 kDa chaperonin OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=groS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV ++  E ++TT+ GL++ +++ EKPS G V+AVG G  ++ G+   L +  GN V++++YAG + K  DG   + ++  +++AV+
Sbjct:    2 NIRPLHDRVVVRRVEEKKTTSSGLIIPDSATEKPSEGVVVAVGNGKKNDNGDTIALDVTIGNKVLFAQYAGTEIK-VDGKKLLIMKEGDIVAVI 94          

HSP 2 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 34/94 (36.17%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +I+PL DRV+V+    ++ T  G+ +P +A  KP  G VVAVG GK       + + V  G +V++++YAGTE++ +G    I++E D+V +++
Sbjct:    2 NIRPLHDRVVVRRVEEKKTTSSGLIIPDSATEKPSEGVVVAVGNGKKNDNGDTIALDVTIGNKVLFAQYAGTEIKVDGKKLLIMKEGDIVAVIK 95          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_STAS11.026e-1238.0410 kDa chaperonin OS=Staphylococcus saprophyticus ... [more]
CH10_STAES1.026e-1238.0410 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH10_STAEQ1.026e-1238.0410 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH10_RALEH1.026e-1237.2310 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]
CH10_KOSOT1.026e-1240.0010 kDa chaperonin OS=Kosmotoga olearia (strain TBF... [more]
CH10_ANASL1.026e-1237.6210 kDa chaperonin OS=Anabaena sp. (strain L31) GN=... [more]
CH10_AMOPS1.026e-1239.7810 kDa chaperonin OS=Amoeba proteus symbiotic bact... [more]
CH10_ALCBS1.026e-1239.1310 kDa chaperonin OS=Alcanivorax borkumensis (stra... [more]
CH10_PSEMY1.340e-1238.0410 kDa chaperonin OS=Pseudomonas mendocina (strain... [more]
CH10_VESOH1.750e-1235.1110 kDa chaperonin OS=Vesicomyosocius okutanii subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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