CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_ACISJ (10 kDa chaperonin OS=Acidovorax sp. (strain JS42) GN=groS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +++PL DRV+VK    E  T  GI +P  A  KP  GEV+AVG GK   K +L  ++VK G +V++ KY+G  ++ NG    +++EDD+  ++E
Sbjct:    2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVNGDELLVMKEDDLFAVVE 95          

HSP 2 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 33/94 (35.11%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV +K  E+E TTA G+++ + + EKP  G V+AVGPG  +++G    L++  G+ V++ KY+G   K  +G   + ++  ++ AV+
Sbjct:    2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVK-VNGDELLVMKEDDLFAVV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RHOFD (10 kDa chaperonin OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            ++PL DRV+VK    E KT  GI +P +A  KP  GEV+AVG GK   K ++  ++VK G +V++ KY+G  ++  G    +++EDD+  ++E
Sbjct:    3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVKVAGDELLVMKEDDLFAVVE 95          

HSP 2 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 32/92 (34.78%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV +K  E E  TA G+++ +++ EKP  G V+AVGPG  +++G   P+++  G+ V++ KY+G   K + G   + ++  ++ AV+
Sbjct:    4 RPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVKVA-GDELLVMKEDDLFAVV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MACCJ (10 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP  +RV I+  E E TTA G++LT+++KEK + GTV+AVG G +   G R  + ++ G+ V+Y  + G + K  D  +YI L+  +++A++
Sbjct:    3 KPYGNRVVIQKTERETTTASGIVLTDSAKEKTNEGTVVAVGTGRILNNGERVEIGVSVGDRVVYEPFGGTEVKTGD-ESYIVLKEEDIIAIV 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DELAS (10 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 37/94 (39.36%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +++PL DRV+VK    E KT  GI +P  A  KP  GEV+AVG GK   K + + ++VK G +V++ KY+G  ++ +G    +++EDD+  ++E
Sbjct:    2 NLRPLHDRVIVKRLENETKTASGIVIPENAAEKPDQGEVLAVGPGKKNDKGEVIALNVKVGDRVLFGKYSGQTVKVHGDELLVMKEDDLFAVVE 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MARMS (10 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groS PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +I+PL DRV+V+ K  E  T  GI LP +A+ KP  GEV+AVG G+      +  ++VK G  V++ +Y+G  ++  G    I++ED++ GI+E
Sbjct:    2 NIRPLHDRVVVRRKEEETTTASGIVLPGSAKEKPTQGEVLAVGTGRIQSNGDVQALAVKVGDTVLFGQYSGQTVKIEGDELLIMKEDEIYGIVE 95          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV ++  E E TTA G++L  ++KEKP+ G V+AVG G +   G+ + L++  G+TV++ +Y+G   K  +G   + ++  E+  ++
Sbjct:    2 NIRPLHDRVVVRRKEEETTTASGIVLPGSAKEKPTQGEVLAVGTGRIQSNGDVQALAVKVGDTVLFGQYSGQTVK-IEGDELLIMKEDEIYGIV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_FINM2 (10 kDa chaperonin OS=Finegoldia magna (strain ATCC 29328) GN=groS PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 38/94 (40.43%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 SIKPLGDR-VLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            ++KP+GDR VL K +  EEKT  GI LP +A+  P   EV+A+G  +     K+  ++K G +VIYSKYAGTE++    ++ +V+ +D++ ++E
Sbjct:    2 NLKPIGDRLVLKKQEKEEEKTFSGIVLPSSAKEAPVYAEVLAIGS-EVEEDEKMKGNIKVGDKVIYSKYAGTEIKLEDTDYILVKYEDILAVVE 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_VIBSL (10 kDa chaperonin OS=Vibrio splendidus (strain LGP32) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 32/94 (34.04%), Postives = 61/94 (64.89%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV ++  E E  +AGG++LT ++ EK + GT++AVG G + E G+ +PL +  G+TV++++  G   +  +G   + +  F +MA++
Sbjct:    2 NIRPLHDRVIVERQEVESKSAGGIVLTGSAAEKSTRGTILAVGKGRILENGSLQPLDVKVGDTVIFAEDRGTRAEKIEGKEVLIMSEFNIMAIV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAAW (10 kDa chaperonin OS=Staphylococcus aureus (strain MW2) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP+ +RV I+  E E+TT  G++LT+++KEK + G ++AVG G L  +G R    +  G+ V++ +YAG + K  D   Y+ L   +++AV+
Sbjct:    3 KPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVK-RDNETYLVLNEEDILAVI 93          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 31/93 (33.33%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KP+G+RV+++ K  E+ T  GI L  +A+ K   G +VAVG G+ +    ++   VK G +V++ +YAGTE++ +   + ++ E+D++ ++E
Sbjct:    2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAAU (10 kDa chaperonin OS=Staphylococcus aureus GN=groS PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP+ +RV I+  E E+TT  G++LT+++KEK + G ++AVG G L  +G R    +  G+ V++ +YAG + K  D   Y+ L   +++AV+
Sbjct:    3 KPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVK-RDNETYLVLNEEDILAVI 93          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 31/93 (33.33%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KP+G+RV+++ K  E+ T  GI L  +A+ K   G +VAVG G+ +    ++   VK G +V++ +YAGTE++ +   + ++ E+D++ ++E
Sbjct:    2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAAT (10 kDa chaperonin OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP+ +RV I+  E E+TT  G++LT+++KEK + G ++AVG G L  +G R    +  G+ V++ +YAG + K  D   Y+ L   +++AV+
Sbjct:    3 KPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVK-RDNETYLVLNEEDILAVI 93          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 31/93 (33.33%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KP+G+RV+++ K  E+ T  GI L  +A+ K   G +VAVG G+ +    ++   VK G +V++ +YAGTE++ +   + ++ E+D++ ++E
Sbjct:    2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_ACISJ2.985e-1240.4310 kDa chaperonin OS=Acidovorax sp. (strain JS42) ... [more]
CH10_RHOFD3.899e-1239.7810 kDa chaperonin OS=Rhodoferax ferrireducens (str... [more]
CH10_MACCJ3.899e-1238.0410 kDa chaperonin OS=Macrococcus caseolyticus (str... [more]
CH10_DELAS3.899e-1239.3610 kDa chaperonin OS=Delftia acidovorans (strain D... [more]
CH10_MARMS5.092e-1239.3610 kDa chaperonin OS=Marinomonas sp. (strain MWYL1... [more]
CH10_FINM25.092e-1240.4310 kDa chaperonin OS=Finegoldia magna (strain ATCC... [more]
CH10_VIBSL6.650e-1234.0410 kDa chaperonin OS=Vibrio splendidus (strain LGP... [more]
CH10_STAAW6.650e-1236.9610 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH10_STAAU6.650e-1236.9610 kDa chaperonin OS=Staphylococcus aureus GN=groS... [more]
CH10_STAAT6.650e-1236.9610 kDa chaperonin OS=Staphylococcus aureus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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