CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAA2 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH1) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP+ +RV I+  E E+TT  G++LT+++KEK + G ++AVG G L  +G R    +  G+ V++ +YAG + K  D   Y+ L   +++AV+
Sbjct:    3 KPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVK-RDNETYLVLNEEDILAVI 93          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 31/93 (33.33%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KP+G+RV+++ K  E+ T  GI L  +A+ K   G +VAVG G+ +    ++   VK G +V++ +YAGTE++ +   + ++ E+D++ ++E
Sbjct:    2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_STAA1 (10 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KP+ +RV I+  E E+TT  G++LT+++KEK + G ++AVG G L  +G R    +  G+ V++ +YAG + K  D   Y+ L   +++AV+
Sbjct:    3 KPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVK-RDNETYLVLNEEDILAVI 93          

HSP 2 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 31/93 (33.33%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KP+G+RV+++ K  E+ T  GI L  +A+ K   G +VAVG G+ +    ++   VK G +V++ +YAGTE++ +   + ++ E+D++ ++E
Sbjct:    2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEPG (10 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + E G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEPF (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 34/92 (36.96%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E+ TAGG++L  ++ EK + G ++AVGPG   E G  + LS+  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVI 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LEPCP (10 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV +K  E E  TA G+++ + + EKP  G V+AVGPG  +++G+   L++A G+ V++ KY+G   K  DG   + +R  ++ AV+
Sbjct:    4 RPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFVALNVAVGDRVLFGKYSGQTVK-VDGDELLVMREEDLFAVV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_WOLTR (10 kDa chaperonin OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=groS PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 36/94 (38.30%), Postives = 59/94 (62.77%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            S+  L D VL  IK + E+  GGI LP +A+ KP  GEV+A+GEG +     ++ ++VK G +V Y ++AGTE+E       +++E D++ I++
Sbjct:    5 SLSVLDDSVL--IKPINEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEPU (10 kDa chaperonin OS=Pseudomonas putida GN=groS PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G ++AVG G + E G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEIVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLFF (10 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groS PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = -2
Query:  449 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 721
            IKPLGDR+LVK +  +  + GGI LP  A+ K    EV+A+G GK     + L   VK G  V+  KYAG EL   G  + IV+E +V+ +L
Sbjct:   10 IKPLGDRILVKREEEDTTSHGGIILPDTAKKKQDRAEVLALGTGKRDKDGQILPFEVKVGDIVLIDKYAGQELTIEGEEYVIVQESEVMAVL 101          

HSP 2 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ +K  E + T+ GG++L + +K+K     V+A+G G  D++G   P  +  G+ V+  KYAG +    +G  Y+ ++  EVMAVL
Sbjct:   11 KPLGDRILVKREEEDTTSHGGIILPDTAKKKQDRAEVLALGTGKRDKDGQILPFEVKVGDIVLIDKYAGQELT-IEGEEYVIVQESEVMAVL 101          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_AZOVD (10 kDa chaperonin OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=groS PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 34/92 (36.96%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  +PL++  G+ V++  Y+G++    DG + + +   E+ AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRPLAVKVGDKVVFGPYSGSNTIKVDGEDLLVMGENEIFAVV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEE4 (10 kDa chaperonin OS=Pseudomonas entomophila (strain L48) GN=groS PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 33/94 (35.11%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G +  ++ E++++ ++E
Sbjct:    3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVIE 96          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_STAA26.650e-1236.9610 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH10_STAA16.650e-1236.9610 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH10_PSEPG6.650e-1236.9610 kDa chaperonin OS=Pseudomonas putida (strain GB... [more]
CH10_PSEPF6.650e-1236.9610 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH10_LEPCP6.650e-1238.0410 kDa chaperonin OS=Leptothrix cholodnii (strain ... [more]
CH10_WOLTR8.685e-1238.3010 kDa chaperonin OS=Wolbachia sp. subsp. Brugia m... [more]
CH10_PSEPU8.685e-1235.8710 kDa chaperonin OS=Pseudomonas putida GN=groS PE... [more]
CH10_CHLFF8.685e-1243.4810 kDa chaperonin OS=Chlamydophila felis (strain F... [more]
CH10_AZOVD1.134e-1136.9610 kDa chaperonin OS=Azotobacter vinelandii (strai... [more]
CH10_PSEE41.481e-1135.8710 kDa chaperonin OS=Pseudomonas entomophila (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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