CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEPK (10 kDa chaperonin OS=Pseudomonas putida (strain KT2440) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVV 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 33/94 (35.11%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G +  ++ E++++ ++E
Sbjct:    3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVVE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEP1 (10 kDa chaperonin OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVV 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 33/94 (35.11%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G +  ++ E++++ ++E
Sbjct:    3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVVE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEF5 (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 32/92 (34.78%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G ++AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 32/94 (34.04%), Postives = 62/94 (65.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GE+VAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G +  ++ E++++ ++E
Sbjct:    3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVIE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEAE (10 kDa chaperonin OS=Pseudomonas aeruginosa GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG   + +   E++AVL
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVL 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G    ++ E +++ +LE
Sbjct:    3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEAB (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG   + +   E++AVL
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVL 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G    ++ E +++ +LE
Sbjct:    3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEA8 (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG   + +   E++AVL
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVL 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G    ++ E +++ +LE
Sbjct:    3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEA7 (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG   + +   E++AVL
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVL 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHFIVREDDVVGILE 721
            ++PL DRV+++    E KT GGI LP +A  KP  GEVVAVG G+ +   ++  ++VK G +V++  Y+G+  ++ +G    ++ E +++ +LE
Sbjct:    3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLTR (10 kDa chaperonin OS=Chlamydia trachomatis GN=groS PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ +K  E   T  GG++L + +K+K     V+A+G G  D++G + P  +  GN V+  KY+G +    +G  Y+ ++  EV+AVL
Sbjct:   11 KPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVLALGTGKKDDKGQQLPFEVQVGNIVLIDKYSGQELT-VEGEEYVIVQMSEVIAVL 101          

HSP 2 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            IKPLGDR+LVK +       GGI LP  A+ K    EV+A+G GK   K  +L   V+ G  V+  KY+G EL   G  + IV+  +V+ +L+
Sbjct:   10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVLALGTGKKDDKGQQLPFEVQVGNIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_THEM4 (10 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            ++PLG R+L+K    E++T+GGI LP  A+ KP   EVVAVG          D+ +  G +VI+SKY+GTE++    ++ I+  +D++  +E
Sbjct:    3 VRPLGARLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEVVAVG-----NLEDSDVDIVVGDKVIFSKYSGTEIKIEDDDYIIIDVEDILAKIE 89          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEST (10 kDa chaperonin OS=Pseudomonas stutzeri GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 33/92 (35.87%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G V+AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_PSEPK2.527e-1135.8710 kDa chaperonin OS=Pseudomonas putida (strain KT... [more]
CH10_PSEP12.527e-1135.8710 kDa chaperonin OS=Pseudomonas putida (strain F1... [more]
CH10_PSEF52.527e-1134.7810 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH10_PSEAE2.527e-1136.9610 kDa chaperonin OS=Pseudomonas aeruginosa GN=gro... [more]
CH10_PSEAB2.527e-1136.9610 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH10_PSEA82.527e-1136.9610 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH10_PSEA72.527e-1136.9610 kDa chaperonin OS=Pseudomonas aeruginosa (strai... [more]
CH10_CHLTR2.527e-1135.8710 kDa chaperonin OS=Chlamydia trachomatis GN=groS... [more]
CH10_THEM43.300e-1138.0410 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]
CH10_PSEST3.300e-1135.8710 kDa chaperonin OS=Pseudomonas stutzeri GN=groS ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
back to top