CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_METPP (10 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            ++PL DRV+VK    E KT  GI +P  A  KP  GEV+AVG GK   K   + ++ K G +V++ KY+G  ++ +G    ++RE+D+  ++E
Sbjct:    3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVE 95          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV +K  E E  TA G+++ + + EKP  G V+AVGPG  +++G+   L+   G+ V++ KY+G   K  DG   + +R  ++ AV+
Sbjct:    4 RPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVK-VDGDELLVMREEDLFAVV 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_COLP3 (10 kDa chaperonin OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELE-FNGANHFIVREDDVVGILE 724
            SI+PL DRV+VK K VE K+ GGI L  +A  K   GEV+AVG G+ +   ++  + VK G QVI+S+  G + E  +G    I+ E D++ I+E
Sbjct:    2 SIRPLHDRVIVKRKKVESKSAGGIVLTGSAAEKSTRGEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLTB (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            IKPLGDR+LVK +       GGI LP  A+ K    EVVA+G GK   K  +L   V+ G  V+  KY+G EL   G  + IV+  +V+ +L+
Sbjct:   10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102          

HSP 2 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ +K  E   T  GG++L + +K+K     V+A+G G  D++G + P  +  G+ V+  KY+G +    +G  Y+ ++  EV+AVL
Sbjct:   11 KPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELT-VEGEEYVIVQMSEVIAVL 101          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLT2 (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            IKPLGDR+LVK +       GGI LP  A+ K    EVVA+G GK   K  +L   V+ G  V+  KY+G EL   G  + IV+  +V+ +L+
Sbjct:   10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102          

HSP 2 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ +K  E   T  GG++L + +K+K     V+A+G G  D++G + P  +  G+ V+  KY+G +    +G  Y+ ++  EV+AVL
Sbjct:   11 KPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELT-VEGEEYVIVQMSEVIAVL 101          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSEU2 (10 kDa chaperonin OS=Pseudomonas syringae pv. syringae (strain B728a) GN=groS PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 32/92 (34.78%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G ++AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSESM (10 kDa chaperonin OS=Pseudomonas syringae pv. tomato GN=groS PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 32/92 (34.78%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G ++AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PSE14 (10 kDa chaperonin OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=groS PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 32/92 (34.78%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL+DRV I+ +E E  TAGG++L  ++ EKP+ G ++AVG G + + G  + L++  G+ V++  Y+G++    DG + + +   E++AV+
Sbjct:    4 RPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEIVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH101_VIBCH (10 kDa chaperonin 1 OS=Vibrio cholerae GN=groS1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV ++  E E  +AGG++LT ++ EK + G V+AVG G + E G+ +PL +  G+TV++++  G   +  DG   + L   +++A++
Sbjct:    2 NIRPLHDRVIVERQEVESKSAGGIVLTGSAAEKSTRGKVLAVGKGRILENGSVQPLDVKVGDTVIFAESYGTKTEKIDGKEVLILAEHDILAIV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_WOLPP (10 kDa chaperonin OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=groS PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 33/94 (35.11%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            ++  L D VL  IK + E+  GGI LP +A+ KP  GEV+A+G G +     ++ ++VK G +V Y ++AGTE+E +   + +++E D++ +++
Sbjct:    5 NLNVLDDNVL--IKPITEEKQGGIVLPSSAEKKPTKGEVIAIGSGSRNSSGERIALTVKTGDKVFYRQWAGTEVEHDNEKYVVMKESDLLAVIK 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_VIBFM (10 kDa chaperonin OS=Vibrio fischeri (strain MJ11) GN=groS PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL+DRV ++  E E  +AGG++LT ++ EK + GTV+AVG G + E G  +PL +  G++V++++  G   +  DG   + +   ++MA++
Sbjct:    2 NIRPLHDRVIVERQEVESKSAGGIVLTGSAAEKSTRGTVLAVGKGRILENGTVQPLDVKVGDSVIFAEGYGTKSEKIDGKEVLIMSENDIMAIV 95          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_METPP3.300e-1138.7110 kDa chaperonin OS=Methylibium petroleiphilum (s... [more]
CH10_COLP33.300e-1143.1610 kDa chaperonin OS=Colwellia psychrerythraea (st... [more]
CH10_CHLTB3.300e-1141.9410 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH10_CHLT23.300e-1141.9410 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH10_PSEU24.310e-1134.7810 kDa chaperonin OS=Pseudomonas syringae pv. syri... [more]
CH10_PSESM4.310e-1134.7810 kDa chaperonin OS=Pseudomonas syringae pv. toma... [more]
CH10_PSE144.310e-1134.7810 kDa chaperonin OS=Pseudomonas syringae pv. phas... [more]
CH101_VIBCH4.310e-1134.0410 kDa chaperonin 1 OS=Vibrio cholerae GN=groS1 PE... [more]
CH10_WOLPP5.630e-1135.1110 kDa chaperonin OS=Wolbachia pipientis subsp. Cu... [more]
CH10_VIBFM5.630e-1134.0410 kDa chaperonin OS=Vibrio fischeri (strain MJ11)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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