CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYCUA (10 kDa chaperonin OS=Mycobacterium ulcerans (strain Agy99) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVV 98

HSP 2 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++ G  + I+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYCMM (10 kDa chaperonin OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVV 98

HSP 2 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++ G  + I+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVV 98
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLL2 (10 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = -2 
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            ++KPL DRV+VK    EEKT GG+F+P   + KPQ GEVVAVG GK     + LD+ V  G +V+Y KY+GTE+   G ++ I+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEVNVEGEDYLIMRESDIFAILD 95

HSP 2 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL DRV +K A AEE T GGL + +  KEKP  G V+AVGPG + + G    + +  G  V+Y KY+G +    +G +Y+ +R  ++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEV-NVEGEDYLIMRESDIFAIL 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RHOSR (10 kDa chaperonin OS=Rhodococcus sp. (strain RHA1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVV 97

HSP 2 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  + I+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RHOOB (10 kDa chaperonin OS=Rhodococcus opacus (strain B4) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVV 97

HSP 2 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  + I+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RHOE4 (10 kDa chaperonin OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVG G ++E+GNR P+ +  G+TV+YSKY G + K + G  Y+ L A +V+AV+
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYA-GQEYLILSARDVLAVV 97

HSP 2 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVGEG+   +  ++ + VK G  VIYSKY GTE+++ G  + I+   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGEGRVNEQGNRIPVDVKEGDTVIYSKYGGTEIKYAGQEYLILSARDVLAVV 97
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = -2 
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            ++KPL DRV+VK    EEKT GG+++P   + KPQ GEVVAVG GK     + L++ VK G++V+Y KY+GTE+   G ++ I+RE D+  IL
Sbjct:    2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94

HSP 2 Score: 79.337 bits (194), Expect = 2.442e-14
Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = -2 
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL+DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G +    +G +Y+ +R  ++ A+L
Sbjct:    2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_DESDA (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 43/93 (46.24%), Postives = 67/93 (72.04%), Query Frame = -2 
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            +KPL DRVLVK    EEKT GG+++P  A+ KP  G+VVAVG GK      +  ++VK G +V+++KYAGTE++ +G +H ++RE+D++ I++
Sbjct:    3 LKPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVKLDGVDHLVMREEDILAIID 95

HSP 2 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 42/92 (45.65%), Postives = 65/92 (70.65%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPLNDRV +K  E EE TAGGL + + +KEKPS G V+AVGPG + + G R  L++  G+ V+++KYAG + K  DG +++ +R  +++A++
Sbjct:    4 KPLNDRVLVKRLETEEKTAGGLYIPDTAKEKPSKGQVVAVGPGKVGDNGERTALAVKAGDEVLFNKYAGTEVK-LDGVDHLVMREEDILAII 94
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2 
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            SIKPLGDRV++K    EE T  GI +   A+ +PQ  EVVAVG G  V   + ++ VK G +V+YSKYAGTE++F G  + I+R+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K  +G  Y  LR  +++A++
Sbjct:    4 KPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
[Close]
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = -2 
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            SIKPLGDRV++K    EE T  GI +   A+ +PQ  EVVAVG G  V   + ++ VK G +V+YSKYAGTE++F G  + I+R+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94

HSP 2 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K  +G  Y  LR  +++A++
Sbjct:    4 KPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_MYCUA9.580e-1948.4210 kDa chaperonin OS=Mycobacterium ulcerans (strai... [more]
CH10_MYCMM9.580e-1948.4210 kDa chaperonin OS=Mycobacterium marinum (strain... [more]
CH10_CHLL29.580e-1948.9410 kDa chaperonin OS=Chlorobium limicola (strain D... [more]
CH10_RHOSR1.251e-1846.8110 kDa chaperonin OS=Rhodococcus sp. (strain RHA1)... [more]
CH10_RHOOB1.251e-1846.8110 kDa chaperonin OS=Rhodococcus opacus (strain B4... [more]
CH10_RHOE41.251e-1846.8110 kDa chaperonin OS=Rhodococcus erythropolis (str... [more]
CH10_PELPB1.251e-1848.3910 kDa chaperonin OS=Pelodictyon phaeoclathratifor... [more]
CH10_DESDA1.251e-1846.2410 kDa chaperonin OS=Desulfovibrio desulfuricans (... [more]
CH10_CLOPE1.251e-1849.4610 kDa chaperonin OS=Clostridium perfringens GN=gr... [more]
CH10_CLOP11.251e-1849.4610 kDa chaperonin OS=Clostridium perfringens (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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