CX672119

Overview
NameCX672119
Unique NameCX672119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CALS8 (10 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            I+P+GDR+L+K K  EE T  GI LP   + KPQ  EV+ VG G  V   K+++ VK G +VI SKYAGTE++ +G  + I+R+DDV+ I+E
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94          

HSP 2 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +P+ DR+ IK  E EE T  G++L +  KEKP I  VI VGPG +  +G +  + +  G+ V+ SKYAG + K  DG  Y  +R  +V+A++
Sbjct:    4 RPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_ANATD (10 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            I+P+GDR+L+K K  EE T  GI LP   + KPQ  EV+ VG G  V   K+++ VK G +VI SKYAGTE++ +G  + I+R+DDV+ I+E
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94          

HSP 2 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +P+ DR+ IK  E EE T  G++L +  KEKP I  VI VGPG +  +G +  + +  G+ V+ SKYAG + K  DG  Y  +R  +V+A++
Sbjct:    4 RPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            +++PL DR+LVK    E KT GGIF+P  A+ KPQ GE+VAVG GK     K + + +K G +V++ KYAGT+++  G    I+REDD++G++E
Sbjct:    2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95          

HSP 2 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 34/94 (36.17%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + +PL DR+ +K  E E  TAGG+ + + +KEKP  G ++AVG G   E+G   P+ +  G+ V++ KYAG D K  +G  ++ +R  +++ V+
Sbjct:    2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIK-IEGQEFLIMREDDILGVI 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            ++P+ DR++VK    E KT GGI++P  A+ KPQ GEVVAVG GK     K L + VK G +V++ KY+GTE++  G ++ I+REDD++G++E
Sbjct:    3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVIE 95          

HSP 2 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +P+ DR+ +K  E E  TAGG+ + E +KEKP  G V+AVG G   E+G   PL +  G+ V++ KY+G + K  +G +Y+ +R  +++ V+
Sbjct:    4 RPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVK-VEGQDYLIMREDDILGVI 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = -2
Query:  446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724
            SIKPLGDRV++K    EE T  GI +   A+ +PQ  EVVAVG G  +   + ++ VK G +V+YSKYAGTE++F G  + I+R+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94          

HSP 2 Score: 79.337 bits (194), Expect = 2.442e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K  +G  Y  LR  +++A++
Sbjct:    4 KPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_ARTCA (10 kDa chaperonin OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 45/92 (48.91%), Postives = 67/92 (72.83%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ ++  EAE+TTA GLL+ ++++EKP  G V+AVGPG   E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++
Sbjct:    6 KPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95          

HSP 2 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = -2
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            SIKPL DR++V+    E+ T  G+ +P +AQ KPQ GEVVAVG G+     ++ + V  G  VIYSKY GTE++  G  + ++   DV+ I+
Sbjct:    4 SIKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_RENSM (10 kDa chaperonin OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18
Identity = 42/92 (45.65%), Postives = 66/92 (71.74%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            KPL DR+ ++  +AE+TTA GL++ +++KEKP  G V+AVGPG +D+ GNR P+ +A G+ V+YSKY G + K + G   + L A +V+A++
Sbjct:    6 KPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVK-TGGEELLVLSARDVLAIV 96          

HSP 2 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = -2
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            SIKPL DR++V+    E+ T  G+ +P +A+ KPQ GEVVAVG G+      ++ + V  G  V+YSKY GTE++  G    ++   DV+ I+
Sbjct:    4 SIKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVKTGGEELLVLSARDVLAIV 96          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18
Identity = 43/93 (46.24%), Postives = 65/93 (69.89%), Query Frame = -2
Query:  446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721
            I+PL DR++VK    E KT GG+F+P  A+ KP  G+V+AVG GK     K+  + +K G  +++SKYAGTE++ +G  H I+RE+DV+G++E
Sbjct:    3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95          

HSP 2 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -2
Query:  149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424
            +PL DR+ +K    E  T GGL + + +KEKP  G VIAVG G + E+G  +PL I  G+T+++SKYAG + K  DG  ++ LR  +V+ V+
Sbjct:    4 RPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIK-LDGEEHLILREEDVLGVI 94          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18
Identity = 43/97 (44.33%), Postives = 69/97 (71.13%), Query Frame = -2
Query:  149 IKDFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRAFEVMAVL 436
            +   KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG  +++G+R+   +  G+ V+YSKYAG D K G++   Y+ L   +++A++
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAIV 102          

HSP 2 Score: 90.8929 bits (224), Expect = 8.110e-18
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = -2
Query:  449 AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 748
            A V+   +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GE+VAVG GK     ++ +  VK G +V+YSKYAGT+++     + ++ E D++ I+
Sbjct:    2 AAVSLSVSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102          
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CHLP8 (10 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.134e-18
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = -2
Query:  449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724
            ++KPL DRV+VK    EEKT GG+++P   + KPQ GEVVAVGEGK     +L  + VK G +V+Y KY+GTE++    ++ I+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQVEAEDYLIMRESDIFAIL 94          

HSP 2 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = -2
Query:  149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430
            + KPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G + +  +  +Y+ +R  ++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQ-VEAEDYLIMRESDIFAIL 94          
The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_CALS81.251e-1848.9110 kDa chaperonin OS=Caldicellulosiruptor saccharo... [more]
CH10_ANATD1.251e-1848.9110 kDa chaperonin OS=Anaerocellum thermophilum (st... [more]
CH10_GEOSL1.634e-1846.8110 kDa chaperonin OS=Geobacter sulfurreducens GN=g... [more]
CH10_GEOSF1.634e-1847.3110 kDa chaperonin OS=Geobacter sp. (strain FRC-32)... [more]
CH10_CLOPS1.634e-1848.3910 kDa chaperonin OS=Clostridium perfringens (stra... [more]
CH10_ARTCA1.634e-1848.9110 kDa chaperonin OS=Arthrobacter chlorophenolicus... [more]
CH10_RENSM2.134e-1845.6510 kDa chaperonin OS=Renibacterium salmoninarum (s... [more]
CH10_MYXXD2.134e-1846.2410 kDa chaperonin OS=Myxococcus xanthus (strain DK... [more]
CH10_CYAP42.134e-1844.3310 kDa chaperonin OS=Cyanothece sp. (strain PCC 74... [more]
CH10_CHLP82.134e-1848.3910 kDa chaperonin OS=Chlorobaculum parvum (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B02-D3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTTTTTGATCAAGCTGCAATTCTTTATGTTCAAATAAAA
TTACAGTCAAAATCCGTATGCCTTGAGGCAACTCAACCATAAAATTCAAT
TCACTAATACATATAAAGCCTCCCTCAAGTAAACACAAACAACTAAAAAA
GCACAGCCATCACTTCAAAAGCTCTTAAAGCAATGTAGTTGGTACCATCA
CTGCCCTTGAAGTCATTCCCTGCATACTTCGAATACATCACCGTGTTCCC
TGGGGCAATGGATAGAGGTTTCCTATTACCTTCCTCATCTAAAGGACCGG
GTCCAACAGCAATGACCGTTCCAATGGAAGGTTTCTCCTTGCTTGCCTCC
GTCAACAACAAACCTCCAGCAGTTGTCTCCTCAGCCTCAGCAACCTTGAT
GAAAACTCTGTCATTAAGGGGCTTAAAATCCTTGATTTCATCTGTTTCAA
GAATGCCAACTACGTCATCCTCCCTCACTATGAAATGATTTGCGCCGTTG
AACTCCAACTCAGTCCCTGCATACTTCGAATAAATGACCTGGGTCCCAGG
CTTCACAGATATGTCCAGTTTAGCCTTCCCAACTGTCTTCCCCTCGCCAA
CAGCTACCACCTCACCTGCTTGAGGCTTTGTTTGAGCTGCAAATGGCAAA
AAAATACCACCATCAGTTTTCTCCTCTACAGTCTTGATTTTCACCAGCAC
TCTATCACCCAAAGGTTTAATTGAAGTGTACTTGGGAGCCACGACTGCAG
CGGCT
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