CX672119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYCGI (10 kDa chaperonin OS=Mycobacterium gilvum (strain PYR-GCK) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 44/95 (46.32%), Postives = 67/95 (70.53%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ L A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVV 98 HSP 2 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V G VIYSKY GTE+++NG + I+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYCAV (10 kDa chaperonin OS=Mycobacterium avium GN=groS PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVV 98 HSP 2 Score: 78.1814 bits (191), Expect = 5.440e-14 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G ++ + V G VIYSKY GTE+++NG + I+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_MYCA1 (10 kDa chaperonin OS=Mycobacterium avium (strain 104) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ L A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVV 98 HSP 2 Score: 78.1814 bits (191), Expect = 5.440e-14 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = -2 Query: 449 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGIL 724 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G ++ + V G VIYSKY GTE+++NG + I+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 ++P+ DR++VK E KT GGIF+P A+ KP GEVVAVG GK K L + VK G +V++ KY+GTE++ G + I+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95 HSP 2 Score: 75.8702 bits (185), Expect = 2.700e-13 Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 +P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K +G +++ +R +++ V+ Sbjct: 4 RPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIK-VEGQDFLIMREDDILGVI 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 ++PL DR+LVK E+ T GGIF+P A+ KPQ GE+VAVG GK K + I +K G +V++ KYAGT+++ G + I+REDD++G++E Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95 HSP 2 Score: 77.7962 bits (190), Expect = 7.105e-14 Identity = 34/92 (36.96%), Postives = 59/92 (64.13%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 +PL DR+ +K E E+ TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K +G +++ +R +++ V+ Sbjct: 4 RPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIK-VEGEDFLIMREDDILGVI 94
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++ + VK G +V++SKY+GTE++ +G + I+R++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAIVE 94 HSP 2 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV IK EAEE T G++L ++KEKP ++AVGPG L +G + + G+ V++SKY+G + K DG Y LR +++A++ Sbjct: 4 KPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVRMEVKVGDKVLFSKYSGTEVK-LDGEEYTILRQNDILAIV 93
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_PROAC (10 kDa chaperonin OS=Propionibacterium acnes GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 42/92 (45.65%), Postives = 64/92 (69.57%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV ++ EAE+TTA GL++ + +KEKP G VI+ GPG +D++G R P+ + G+ V++SKY G + K DG Y+ L A +++AV+ Sbjct: 6 KPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVK-YDGQEYLLLNARDILAVV 96 HSP 2 Score: 77.7962 bits (190), Expect = 7.105e-14 Identity = 37/95 (38.95%), Postives = 62/95 (65.26%), Query Frame = -2 Query: 446 TSIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 727 T+IKPL DRVLV+ E+ T G+ +P A+ KPQ G+V++ G G+ K ++ + VK G VI+SKY GTE++++G + ++ D++ ++E Sbjct: 3 TTIKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVKYDGQEYLLLNARDILAVVE 97
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 42/91 (46.15%), Postives = 67/91 (73.63%), Query Frame = -2 Query: 152 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAV 424 KPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + E G ++PL +A G+TV+++KY+G + +GT+Y+ LR +++A+ Sbjct: 3 KPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 87.8113 bits (216), Expect = 6.866e-17 Identity = 41/91 (45.05%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 452 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGI 721 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++ I+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_COREF (10 kDa chaperonin OS=Corynebacterium efficiens GN=groS PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 149 DFKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 430 + KPL D++ +++ EAE TTA GL++ +++KEKP TVIAVGPG DE+G R PL I + V++S+Y G + K DG Y+ L A +++A++ Sbjct: 5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGERIPLDIKEDDVVIFSRYGGTEIK-FDGVEYLLLSARDILAIV 97 HSP 2 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = -2 Query: 446 SIKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 724 +IKPL D++LV+I E T G+ +P +A+ KPQ V+AVG G+ K ++ + +K VI+S+Y GTE++F+G + ++ D++ I+E Sbjct: 5 NIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDEKGERIPLDIKEDDVVIFSRYGGTEIKFDGVEYLLLSARDILAIVE 98
BLAST of CX672119 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18 Identity = 43/92 (46.74%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 446 IKPLGDRVLVKIKTVEEKTDGGIFLPFAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHFIVREDDVVGILE 721 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++++ VK G +V++S+YAG E++ +G + I+R++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94 HSP 2 Score: 77.7962 bits (190), Expect = 7.105e-14 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = -2 Query: 149 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRAFEVMAVL 424 KPL DRV IK EAEE T G++L ++KEKP ++AVGPG L +G + + G+ V++S+YAGN+ K DG YI LR +++A++ Sbjct: 4 KPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK-IDGEEYIILRQNDILAIV 93 The following BLAST results are available for this feature:
BLAST of CX672119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672119 ID=CX672119; Name=CX672119; organism=Citrus sinensis; type=EST; length=755bpback to top |