CX672118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 180 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 623 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+ +WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E + T+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 55/144 (38.19%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 168 RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599 +M A +R+ +++ + S N+I W AVI GPD TP++GG F L+++F DYP KPP F + ++HPNI +GSIC++IL+++W+P V +L SI LL PNP+ P E ++F N+ ++++R RE Sbjct: 4 KMDKKAAQRIAMEYRAMISKESL-FSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRARE 146
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 614 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 614 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 614 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 614 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 189 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599 KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+FV+ FHPN+ + G+ICLDIL+++WS +YDV IL S+QSLL +PN SP N AA ++ +N+ Y + + E Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELW-QNQTAYKKHLHE 168
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 180 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.248e-24 Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 189 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 596 KR+ ++ + DPP S P+ +++ W + I GP + ++GG F L + F+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + +N+ E++R R Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIAR 224
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.781e-24 Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 180 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168 The following BLAST results are available for this feature:
BLAST of CX672118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 254
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672118 ID=CX672118; Name=CX672118; organism=Citrus sinensis; type=EST; length=789bpback to top |