CX672118

Overview
NameCX672118
Unique NameCX672118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.075e-23
Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = 3
Query:  195 LMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 614
            L+ ++K L  +P      +  ++++  W+ ++ GP DT ++GG FK  + F   YP +PP + F S M+HPNIY+DG +C+ IL           WSP   +  +L S+ SLL +PNP+SPAN +AA+     ++ E+   Y   V++ V++S
Sbjct:    6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS 158          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.016e-23
Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = 3
Query:  171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L  ++D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++R R + E
Sbjct:   11 LSPQTIRQVMRELQEMENTPPEGIKVLINESDVTDIQALIDGPAGTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  201 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            ++   L  DPP GI   P +  +      I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+ A+G IC+++L+  W+    +  +L +I+ LL  PNP S  N EA R+  EN  EY  R R + E
Sbjct:   18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  201 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            ++   L  DPP GI   P +  +      I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+ A+G IC+++L+  W+    +  +L +I+ LL  PNP S  N EA R+  EN  EY  R R + E
Sbjct:   18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 52/150 (34.67%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNS-----IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599
            MS  A  RL  + K  ++D P G    P  N+     +  W   I G  DT W+GG +++ + F +D+P+ PP  +F   +FHPN+Y  G++CL +L     W P   +  +L  IQ LL  PN   PA +EA +++ +N+ EY +RV++
Sbjct:    1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3
Query:  171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L   +D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++R R + E
Sbjct:   11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3
Query:  171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L   +D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++R R + E
Sbjct:   11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3
Query:  171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            +S    +++MR+ + ++  PP GI     ++ +    A+I GP  TP+  G F++ L   +D+P  PP   F++++FHPN+ A+G IC++ L+  W P   +  IL +I+ LL  PNP S  N EA +M  E   +Y++R R + E
Sbjct:   11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 52/153 (33.99%), Postives = 86/153 (56.21%), Query Frame = 3
Query:  195 LMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 614
            L+ +++ L ++P      +  +N++  W+ ++ GP DT ++GG FK  + F  +YP +PP + F S M+HPNIY DG +C+ IL           WSP   +  +L S+ SL  +PN +SPAN +AA+     M  E+   Y   V++ V++S
Sbjct:    6 LLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKS 158          
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23
Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  189 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608
            +++ ++   L  DPP GI   P +  I      I GP+ TP+ GG F++ L   +D+P  PP   F++++FHPN+ ++G IC+++L+  W     +  +L +I+ LL  PNP S  N EA R+  EN  EY  R R + E
Sbjct:   14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTE 153          
The following BLAST results are available for this feature:
BLAST of CX672118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
UBC_ASFM23.075e-2334.64Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBE2S_DROWI4.016e-2334.25Ubiquitin-conjugating enzyme E2 S OS=Drosophila wi... [more]
UBE2S_HUMAN5.245e-2336.76Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens ... [more]
UBE2S_BOVIN5.245e-2336.76Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN... [more]
UBC9_CAEEL5.245e-2334.67SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UBE2S_DROSI6.850e-2334.25Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE6.850e-2334.25Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]
UBE2S_DROME6.850e-2334.25Ubiquitin-conjugating enzyme E2 S OS=Drosophila me... [more]
UBC_ASFK56.850e-2333.99Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBE2S_RANCA8.947e-2335.71Ubiquitin-conjugating enzyme E2 S OS=Rana catesbei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15B01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B01-D1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672118 ID=CX672118; Name=CX672118; organism=Citrus sinensis; type=EST; length=789bp
CTGACCTGAACGACTCTCTCTCTCTTGTTTCTCTGATCAAATTGAGTACC
ATGGAATTCTTTCTCTGATACCGCCCGCTTTTCGATTGTTTCCCGAGAAA
ATCTCGCTGCGATTCTGAAGCTTTTACTGCAATCAACGCTACTTGCCGCG
TCAGCTCGTAGGCAGTGAGAATGTCGACTCCTGCAAGGAAGAGATTGATG
AGGGATTTTAAGAGGTTACAACAAGATCCTCCGGCTGGCATTAGTGGTGC
TCCTCAGGACAACAGTATAATGCTTTGGAATGCTGTTATATTCGGGCCGG
ATGATACCCCATGGGATGGAGGTACGTTTAAATTGACACTTCAGTTCACA
GAGGATTATCCAAATAAGCCACCAACAGTGCGCTTTGTTTCTCGAATGTT
CCATCCAAATATTTATGCGGATGGAAGCATTTGCTTGGACATTCTACAAA
ATCAGTGGAGTCCAATTTACGATGTAGCAGCAATACTCACGTCAATTCAG
TCATTGCTTTGTGACCCAAATCCAAACTCTCCTGCAAATTCGGAGGCAGC
GCGGATGTTTAGCGAGAACAAGCGTGAATACAATAGGAGAGTACGGGAAA
TTGTTGAGCAGAGTTGGACTGCTGACTAGTGGCAACTTGTTGGAATGTAG
GGAACTTCAAAAGTAGTCCAATGGCTTGTTCTAAATAACATTTAAGATTC
AAAAGGTTGGTGGTGTGAACTCTTGACATGTTTTATGTTTGTTTCGGCTT
ATGAGGATGGATGGTTGGCCTCTTATTGTTAATTTCTCG
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