CX672118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.075e-23 Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 614 L+ ++K L +P + ++++ W+ ++ GP DT ++GG FK + F YP +PP + F S M+HPNIY+DG +C+ IL WSP + +L S+ SLL +PNP+SPAN +AA+ ++ E+ Y V++ V++S Sbjct: 6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS 158
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.016e-23 Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 +S +++MR+ + ++ PP GI ++ + A+I GP TP+ G F++ L ++D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 11 LSPQTIRQVMRELQEMENTPPEGIKVLINESDVTDIQALIDGPAGTPYAIGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 201 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 ++ L DPP GI P + + I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ A+G IC+++L+ W+ + +L +I+ LL PNP S N EA R+ EN EY R R + E Sbjct: 18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 201 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 ++ L DPP GI P + + I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ A+G IC+++L+ W+ + +L +I+ LL PNP S N EA R+ EN EY R R + E Sbjct: 18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23 Identity = 52/150 (34.67%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNS-----IMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 599 MS A RL + K ++D P G P N+ + W I G DT W+GG +++ + F +D+P+ PP +F +FHPN+Y G++CL +L W P + +L IQ LL PN PA +EA +++ +N+ EY +RV++ Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 +S +++MR+ + ++ PP GI ++ + A+I GP TP+ G F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 +S +++MR+ + ++ PP GI ++ + A+I GP TP+ G F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23 Identity = 50/146 (34.25%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 171 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 +S +++MR+ + ++ PP GI ++ + A+I GP TP+ G F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23 Identity = 52/153 (33.99%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 195 LMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 614 L+ +++ L ++P + +N++ W+ ++ GP DT ++GG FK + F +YP +PP + F S M+HPNIY DG +C+ IL WSP + +L S+ SL +PN +SPAN +AA+ M E+ Y V++ V++S Sbjct: 6 LLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKS 158
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23 Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 189 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 +++ ++ L DPP GI P + I I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ ++G IC+++L+ W + +L +I+ LL PNP S N EA R+ EN EY R R + E Sbjct: 14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTE 153 The following BLAST results are available for this feature:
BLAST of CX672118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 254
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672118 ID=CX672118; Name=CX672118; organism=Citrus sinensis; type=EST; length=789bpback to top |