CX672118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.687e-21 Identity = 47/128 (36.72%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 258 DNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILT-SIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD*WQ 635 ++S+ ++ GP DTP++ G ++L ++ ++YP K P++ FV+++FHPNI A GSICLD++ + WSP+YD+ I+ I LL +PN + P N+EAA + +K+ Y +++E +++ T + +Q Sbjct: 26 NDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYATKEKYQ 153
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.878e-21 Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 611 RL R+ L +PP GI+ + + A I G +TP++ G FKL + E YP +PP +RF++ ++HPNI + G ICLD+L + W P ++A +LTSIQ L+ +PNP+ P ++ + F NK + + R+ E+ Sbjct: 6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK 149
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.759e-21 Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 611 RL R+ L +PP GI+ + + A I G +TP++ G FKL + E YP +PP +RF++ ++HPNI + G ICLD+L + W P ++A +LT IQ L+ +PNP+ P ++ + F NK + + R+ E+ Sbjct: 6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEK 149
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.759e-21 Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 153 SS*AVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 SS +S +++ ++ L PP G+ P + I A I GP TP++GG FK+ L +D+P PP F++++FHPN+ +G IC++ L+ W + IL +I+ LL PNP S N EA ++ E Y+ R R + E Sbjct: 4 SSNVENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTE 155
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.412e-21 Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 RL ++ L +PP GI+ + + + A I G +TP++ G F L + E YP +PP VRF++ ++HPNI + G ICLDIL + W P ++A +LTSIQ L+ +PNP+ P ++ + F NK + ++ ++ E Sbjct: 6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTE 148
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.374e-21 Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGIS---------GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 611 R+ ++ K L DPP G S G+ ++ +A I GP+DT + G F L +Q E YP +PP V F + ++HPNI G ICLDIL + W P +++ +LTS++ LL +PNP+ E +R + N++ ++ + RE+ E+ Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.094e-20 Identity = 47/130 (36.15%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPD-DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 578 R++++ +RL +P GI P +++ ++ VI G D+P++GGTFK L E+YP P VRF+++++HPN+ I LDIL+++WSP + +L SIQ+LL PNP+ P ++ + N+ + Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQ 136
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.094e-20 Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 201 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 608 ++ L DPP GI P + I + I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ G IC+++L+ W + +L +I+ LL PNP S N EA ++ E+ +EY R + E Sbjct: 18 KEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTE 153
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.094e-20 Identity = 47/147 (31.97%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 174 STPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 611 S + +RL +++ L++ P I D+++ W GP D+ + GG F +L+F DYP +PPT+ F +R++HPN ++G++CL IL+ Q + P + ++L I LL +PNP+ P + A + ++ +++ R+ VEQ Sbjct: 5 SPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQ 151
BLAST of CX672118 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20 Identity = 52/147 (35.37%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 192 RLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 620 RL R+ + L ++PP G+ ++++ A I G +P++GG F L + E YP +PP +RF++ ++HPNI + G ICLDIL + W P +++ +LTSIQ L+ +PNP+ P ++ + F +YNR V + WT Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEF-----KYNRAVFFSNAKKWT 147 The following BLAST results are available for this feature:
BLAST of CX672118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 254
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672118 ID=CX672118; Name=CX672118; organism=Citrus sinensis; type=EST; length=789bpback to top |