CX672107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = -3 Query: 212 GRVETGVLKPGMVVTFGPSGLTTEVKSV-EMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 742 G++E G +K V P T EV ++ + E + ++ GD V V+ D++ G+V +++K+ P F +Q+ I+ P + GY+ V+ HT+ V F++L+ K+D+ + K +K P F G + ++ P+ +E F DY +GRF +RD TVAVG + + Sbjct: 486 GKIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEEISSSICGDQVRLRVRGDD-SDVQTGYVLTSTKN-PVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.176e-15 Identity = 45/179 (25.14%), Postives = 89/179 (49.72%), Query Frame = -3 Query: 206 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 742 G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 507 GKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 684
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15 Identity = 45/179 (25.14%), Postives = 89/179 (49.72%), Query Frame = -3 Query: 206 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 742 G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 507 GKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEMKE 684
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.332e-15 Identity = 44/179 (24.58%), Postives = 88/179 (49.16%), Query Frame = -3 Query: 206 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 742 G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 502 GKIEAGYVQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILIFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 679
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.332e-15 Identity = 43/179 (24.02%), Postives = 88/179 (49.16%), Query Frame = -3 Query: 206 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 742 G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F +++++ N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 505 GKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 682
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.842e-14 Identity = 43/178 (24.16%), Postives = 87/178 (48.88%), Query Frame = -3 Query: 209 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 742 G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R T+A GV+ ++ Sbjct: 509 GKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKE-PIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIK 685
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.104e-14 Identity = 45/184 (24.46%), Postives = 92/184 (50.00%), Query Frame = -3 Query: 200 GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKR---GFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 742 GRVE G + P + +T P+G+ E +SVE+H++ G+N G +K + ++ + G V S + ++ A + I++ P + GY P ++ H + +++++K+ GKE+ + P+ + NG+ ++ KP+V++ + L +FA+ D V +G + +D Sbjct: 299 GRVEYGTITPNLKITIQPAGVVGETRSVEIHNKPRSMIPCGENCGVALKGGVIGEIDKVDAGHVISANDENKAVAYPGAKIRTIVVGRPKGLSPGYTPQINFGNCHSPGRIAKILSKV---VGKEVHENPENVANGENFTGIVVFQKPLVIDKMERFQNLAKFALMDSNGVVGIGNVMEPLTRD 479
BLAST of CX672107 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13 Identity = 47/184 (25.54%), Postives = 88/184 (47.83%), Query Frame = -3 Query: 203 VGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 745 +G+VE+G + G + P EV S+ + + A PG+N+ +K + D R + P + + V I++ P + ++ + HT+ V L+ ID ++ E++++P F K GDA +++ + + +E F+ P L RF +RD +T+A G + N+ KK Sbjct: 363 IGKVESGTISVGQSIHIMPGKTKVEVISLTGDICSFKTARPGENITIALKGIEGDDSIRPGSILAEINRPVPVVSEIEAIVYILDMPEERRLFTPSFSAIFHAHTAVEDVTVKSLIATIDTKTSTEIKQKPTFCKVGDAVKCRLVLGRAVCLEEFTTNPQLARFTIRDSTKTIAFGKVINIGKK 546 The following BLAST results are available for this feature:
BLAST of CX672107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672107 ID=CX672107; Name=CX672107; organism=Citrus sinensis; type=EST; length=750bpback to top |