EY664640

Overview
NameEY664640
Unique NameEY664640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.885e-28
Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 3
Query:   21 YSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 308
            Y  Y ELS A + MF+ FTIG+ GSH    +++   +KL+D L   E+V TYEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++AIGLAPRAVEKC
Sbjct:  143 YKSYPELSMAFQNMFTSFTIGKCGSH----QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKC 231          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.441e-27
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ YS Y++LS ALEKMFSCF  G+  SH    R+ L++    D L   E+VLTYEDKD DWMLVGD+PW++F  +C++LRIM+ +DA G+APR++E+
Sbjct:  179 LKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ YS Y++LS ALEKMFSCF  GQ G   +  R+ L+     D L   E+VLTYEDKD DWMLVGD+PW++F   C++L+IM+ +DA G+APR++E+
Sbjct:  169 LKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ YS Y++LS ALEKMFSCF  GQ G   +  R+ L+     D L   E+VLTYEDKD DWMLVGD+PW++F   C++L+IM+ +DA G+APR++E+
Sbjct:  170 LKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 267          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.340e-25
Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y  Y++LS+ALEKMF  FT G+ G         LSES+ KD     E+VLTYEDKDGDWMLVGDVPWEMF ++C+RLRIMK +DAIGLAPRAV+K
Sbjct:  169 LKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDK 252          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 56/98 (57.14%), Postives = 67/98 (68.37%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y  Y+++S  LEKMF  F+ G+ G+              KD     E+VLTYEDKDGDWMLVGDVPWEMF D+C+RLRIMK +DAIGLAPRA EK
Sbjct:  176 LKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEK 258          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.649e-23
Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 3
Query:   12 LENYSKYQELSSALE-KMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVE 302
            LE YS Y +L  AL+ K FS FTI ++            E KL D ++G+E+V TYEDKDGDWMLVGDVPW+MF++TC+RLR+MKS++A+ LAPRA +
Sbjct:  111 LEAYSGYDQLLRALQDKFFSHFTIRKFAD---------DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.387e-22
Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y+ Y++LS AL+KMF  FT        A G  M       + ++GS+ V TYEDKDGDWMLVGDVPW+MF+++CKRLRIMK ++AIGLAPRA +K
Sbjct:  149 LKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.387e-22
Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 3
Query:   12 LENYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 305
            L+ Y+ Y++LS AL+KMF  FT        A G  M       + ++GS+ V TYEDKDGDWMLVGDVPW+MF+++CKRLRIMK ++AIGLAPRA +K
Sbjct:  149 LKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDK 231          
BLAST of EY664640 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.365e-22
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 3
Query:   12 LENYSKYQELSSALE-KMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRA 296
            LE Y  Y +L +AL+ K FS FTI + G+          E KL D + G+E+V TYEDKDGDWMLVGDVPW+MF++TC+RLR+MKS++A+ LAPR+
Sbjct:  125 LEAYRGYDQLLAALQDKFFSHFTIRKLGNE---------EMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211          
The following BLAST results are available for this feature:
BLAST of EY664640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IAA11_ORYSJ2.885e-2863.54Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]
IAA19_ORYSJ5.441e-2754.08Auxin-responsive protein IAA19 OS=Oryza sativa sub... [more]
IAA5_ORYSJ2.700e-2653.06Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA5_ORYSI2.700e-2653.06Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA17_ORYSJ1.340e-2563.27Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]
IAA3_ORYSJ2.794e-2357.14Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA1_ORYSJ3.649e-2355.10Auxin-responsive protein IAA1 OS=Oryza sativa subs... [more]
IAA13_ORYSJ1.387e-2255.10Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA13_ORYSI1.387e-2255.10Auxin-responsive protein IAA13 OS=Oryza sativa sub... [more]
IAA15_ORYSJ2.365e-2255.21Auxin-responsive protein IAA15 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664640 ID=EY664640; Name=EY664640; organism=Citrus sinensis; type=EST; length=643bp
CCACGCGTCCGCTTGAAAATTACTCTAAATATCAGGAACTATCTTCTGCC
CTTGAGAAGATGTTCAGCTGCTTTACAATTGGGCAATATGGATCTCATGG
GGCTCTGGGCAGGGAGATGCTGAGTGAAAGCAAGTTGAAGGATCTGCTAC
ATGGCTCAGAATTCGTTCTCACTTATGAAGACAAAGATGGGGATTGGATG
CTTGTGGGTGATGTCCCCTGGGAGATGTTTATTGATACATGCAAGAGGTT
GAGGATTATGAAGAGCACTGATGCCATTGGCCTAGCGCCAAGGGCTGTGG
AGAAATGCAGGAACAGAAACTAGCTACTGTTCAACATATTGTTGGTATTC
ATCCAGCAATTCTCGGTGATAAAATTCTGGCAGATGACAGAAAATAACAT
GATCCAAATTCATGCTTGGGGGTGTTGGAGGGCATCTGCTTTTCTGTGTT
ACCACATTACTACGTTTACTGTGATGGATTTTCATGTTCTGTAAGCTGTG
ATTGTTGTCTTGTTATTAAAATTATAAAACTCTCGTAGACCTTGTATTTT
GGAGTGAACCTCTGAGATTGGATCTCCTCAAGGAGTTCTGACAAGTTCCT
GTTCCCAACAGGTACCTTAGTTTGTAAAAAAAAAAAAAAAAAA
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