CX672087

Overview
NameCX672087
Unique NameCX672087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 62/211 (29.38%), Postives = 103/211 (48.82%), Query Frame = 2
Query:   95 DGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            D  + + Y  G++  + SGK+   +NP T      +Q  SQ ++   +++A   QK+WA     +R+ +L +A  IL+E    +A+    +  K   +  T +++   D++ Y A     I GE   L   SF          T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + A  +   +  AG P G+ + V
Sbjct:    3 DVKLHRLYIHGQYTDATSGKTFDSINPATGEVIATIQQASQTDIEAAVKSAAEGQKVWAAKTAVERSRILRRAVDILRERNDELAQLETLDTGKAFSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSF--------FYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTAFKLAEIYSEAGLPAGVFNVV 205          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22
Identity = 66/208 (31.73%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  104 VFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            V + Y  G+   + SGK+   VNP T     +VQ  SQ +V + +++A   QK+WA     +R+ +L +A  IL+E    +A     +  K   +  T +++   D+V Y A     I G    L   SF          T + PLGVV  I  +NYP+ +A+ K APAL AGN++V KP     + A+ +   +  AG P G+ + V
Sbjct:    6 VQQLYIHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLRESSF--------FYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVV 205          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: IOLA_BACHD (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus halodurans GN=iolA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = 2
Query:   83 AEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            A +  G+  K +  G+W +S+SGK+  + NP T      V   ++E++++ +  AK A K W KTP+ +RA +L K   +L E+   +A  +  E  K  K+A  EV R  + V + A  G   L  GK L  D     E   Y    + P+GVV  I PFN+P+ +       A+  GN+ VLKP  +  + A  +   F  AG P+G+++ V
Sbjct:    2 ANLATGEKLKNFIGGQWVESDSGKTEAVPNPATGEILAHVPISNREDLDRAVSVAKEAFKTWGKTPVPRRARVLFKYQQLLVENWEELARLVTLENGKSYKEAYGEVQRGIECVEFAA--GAPSLMMGKQL-PDIATNIESGMY----RYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPLLANRLAELFTEAGLPEGVLNIV 208          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 62/206 (30.10%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  110 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            K Y +G +  S  GK+   VNP       ++Q+ S E+VN+ + +A + QK+WA      R+ +L +A  IL+E    +A     +  K   +    +++   D++ Y A     I G+         P  + T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + V
Sbjct:    8 KLYINGAYVDSTDGKTFNAVNPANGEVLAEIQSASAEDVNRAVASAASGQKVWAAMTAMARSRILRRAVDILRERNDELAALETLDTGKAMSETTAVDIVTGADVLEYYAGLIPSIEGQ-------QIPLRD-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPDGVFNVV 205          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: IOLA2_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 70/205 (34.15%), Postives = 102/205 (49.76%), Query Frame = 2
Query:  110 KYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            K +  G+W  S SGK   + NP T     KV   S+EE++  + AAK A + W K P+ +RA +L +   +L EH   +A  +  E  K  +DA  EV R  + V + A  G+  L  G+ L  D   G E   Y    + PLGVV  I PFN+P+ +       A+  GN+ VLKP  +  + A  +   F  AG P G+++ V
Sbjct:    8 KNFIGGQWVASTSGKEEIVPNPATGEVLAKVPISSREELDAAVAAAKEAFREWRKVPVPRRARILFRYQQLLVEHWEELARLVTLENGKVYEDAYGEVQRGIECVEFAA--GIPTLMMGQQL-PDIATGIESGMY----RYPLGVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPSERTPLLANRLAELFTEAGLPAGVLNIV 205          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_ECOLC (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=betB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 60/202 (29.70%), Postives = 102/202 (50.50%), Query Frame = 2
Query:  116 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLIS 718
            Y  G +  + SG++   +NP        VQA  +E+V++ +++A+  QK+WA     +R+ +L +A  IL+E    +A+    +  K   +  T +++   D++ Y A       G    L     P  E T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ +
Sbjct:   10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPNGVFN 203          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 60/202 (29.70%), Postives = 102/202 (50.50%), Query Frame = 2
Query:  116 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLIS 718
            Y  G +  + SG++   +NP        VQA  +E+V++ +++A+  QK+WA     +R+ +L +A  IL+E    +A+    +  K   +  T +++   D++ Y A       G    L     P  E T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ +
Sbjct:   10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFN 203          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 60/202 (29.70%), Postives = 102/202 (50.50%), Query Frame = 2
Query:  116 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLIS 718
            Y  G +  + SG++   +NP        VQA  +E+V++ +++A+  QK+WA     +R+ +L +A  IL+E    +A+    +  K   +  T +++   D++ Y A       G    L     P  E T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ +
Sbjct:   10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFN 203          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21
Identity = 60/209 (28.71%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  101 DVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            +V  +Y  G+    ++G+S   +NP T      ++   +  +   +E+AK    +W+     +R+  L KAA ++++H   +AE  V++  KP ++A V ++    D++ Y A     + GE + L S+ F          T + PLG+   I  +NYP+ +A+ K APAL AGN+++ KP  +  ++AL +   F  AG P G+ + V
Sbjct:    2 EVTAHYIGGKPFVGDTGESFATLNPATGEVLAHIEQADERVLGHAIESAKLGFSVWSSMSAAERSRCLLKAAQLIRDHNDELAELEVRDTGKPIQEASVVDIATGADVIEYFAGLVNGLGGEQQSLGSNQF--------FYTRREPLGICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKPSEETPLSALKLAELFTQAGVPDGVFNVV 202          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21
Identity = 60/202 (29.70%), Postives = 102/202 (50.50%), Query Frame = 2
Query:  116 YADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLIS 718
            Y  G +  + SG++   +NP        VQA  +E+V++ +++A+  QK+WA     +R+ +L +A  IL+E    +A+    +  K   +  T +++   D++ Y A       G    L     P  E T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ +
Sbjct:   10 YIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYA-------GLIPALEGSQIPLRE-TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFN 203          
The following BLAST results are available for this feature:
BLAST of CX672087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_ACIAD6.571e-2229.38Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
BETB_STRM58.582e-2231.73Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
IOLA_BACHD1.121e-2132.24Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_SERP51.121e-2130.10Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
IOLA2_GEOTN1.464e-2134.15Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_ECOLC1.464e-2129.70Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI1.912e-2129.70Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH1.912e-2129.70Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_VIBVU2.497e-2128.71Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
BETB_SHIF82.497e-2129.70Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14H03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14H03-O6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672087 ID=CX672087; Name=CX672087; organism=Citrus sinensis; type=EST; length=725bp
CTTCAGTCTTCAGTTGACCTTCTTCAACTAGTTTACTCTGTTGGGTGGTT
CATTGTGAGAAATGGCTGGCAATGGTATTTTTGCTGAGATTTTAGATGGG
GACGTGTTCAAGTACTATGCTGATGGCGAATGGAAGAAGTCTAATTCTGG
CAAAAGCGTTCCCATTGTCAACCCCACTACTCGCAGAACTCACTACAAAG
TTCAGGCTTGTTCACAAGAGGAGGTGAACAAGGTAATGGAAGCAGCAAAA
GCTGCACAAAAATTATGGGCAAAGACTCCGCTTTGGAAGAGAGCTGAGCT
CCTGCACAAGGCTGCTGCAATTCTCAAAGAGCACAAGGCCCCCATTGCTG
AGTGTTTGGTTAAAGAAATTGCAAAGCCAGCGAAAGATGCTGTCACTGAG
GTTATAAGGTCTGGAGATTTGGTCTCTTATTGTGCCGAAGAGGGTGTTCG
GATTCTCGGAGAAGGGAAGTTTTTGGTGTCTGATAGCTTCCCCGGAAATG
AGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTTG
GCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTGC
TCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAGG
GTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTTT
CCTAAAGGCCTTATAAGCTGTGTCA
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