CX672082

Overview
NameCX672082
Unique NameCX672082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672082 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.427e-20
Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = -3 
Query:  220 PCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG---DADADMPPLED---AADDAEGSKMEEVD 618
            PC +VT +YGW++NME+IM+AQ L D S   YM  K+ +EINP +PI++ELR +   D + + +K           + SGF+L DP  F + I+R ++  L +  DA    + + + P +E+   A  +AE  + E+ D
Sbjct:  667 PCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVAQDSDSEGLKQTARLVYQTALMESGFNLPDPKDFASSIYRSVQKSLDLSPDAAVEEEEEVEEPEVEEKESAKQEAEEPEHEQYD 805
[Close]
BLAST of CX672082 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.822e-19
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = -3 
Query:  220 PCCLVTGEYGWTANMERIMKAQALRDNS-MAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 618
            PC LV  +YGW+ANMERIMKAQA +       Y +S+KT EINP +P++ ++ +     ++DK+V D          L SG+ L D   +G+RI R+++L L+I+ DA   +      ED  +D E  + EE+D
Sbjct:  563 PCALVASQYGWSANMERIMKAQAYQTGKDSTKYYASQKTFEINPRHPLIRDMLR---IKEDDKTVMDLAVVLFETAILRSGYLLPDTKAYGDRIERIVRLSLNIDPDAKVEEEPEEEPEDTTEDTEQDEEEEMD 693
The following BLAST results are available for this feature:
BLAST of CX672082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ENPL_HORVU7.427e-2035.97Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_RABIT2.822e-1938.81Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14G12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14G12-M24-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672082 ID=CX672082; Name=CX672082; organism=Citrus sinensis; type=EST; length=809bp
TTTAAGATAACTATATCAAATACCATAGATTCGGAAACAGCATACTTTTT
AAGCATTTGCAAAACAATAAAACAAAACCTCCACCAAAGAGGGAAAATAA
AAATATAAAAGCACTACTCCCACAGTACTACCACCACACAACGCATAACA
AAAAGAAACTACCTAGTTAAAAGAGTTTCATGAAAAAAGACTACTATAGC
AGACTATTATAGCTTCTTAATCAACTTCCTCCATCTTGCTGCCCTCAGCA
TCGTCAGCAGCATCCTCCAATGGTGGCATGTCAGCATCAGCATCACCAGC
ATCCTCCTCGATGCTCAGCCCGAGTTTCAACATCCTGTGGATTCTGTTGC
CGAAAGTGTTAGGGTCATCAAGGCTGAAACCAGAAGTGAGGAGAGCAGTC
TCAAAGAGCAGAAGGACAAGGTCCTTCACAGACTTGTCATTCTTGTCAGC
ATCAGCCCTCTTCCTGAGCTCCTCCATGATGGGGTTCTCCGGATTGATCT
CCATGGTCTTCTTGCTGGACATGTAACCAGCCATGCTGTTGTCTCTCAAG
GCCTGAGCCTTCATGATCCTCTCCATGTTGGCTGTCCATCCATACTCACC
AGTCACCAAACAGCAGGGTGAGTCAACAACACGGTCAGACACCACAACCT
TCTCGACCTTGTCACCCAAAACATCCTTGATCACCTTGCAGAGACCCTCA
AATTTCTCCTTCAAGGTTTCCTTCTTCTTCTTCTCATCTTCACTCTCGTC
AAGCTTGAGACCTTCTTTGGTGGCTGAGACAAGCTTCTTTCCCTCAAACT
CCTTGAGCT
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