CX672059

Overview
NameCX672059
Unique NameCX672059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP1M1_YEAST (AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae GN=APM1 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.037e-52
Identity = 98/223 (43.95%), Postives = 153/223 (68.61%), Query Frame = 1
Query:  136 ASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMA-ASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVTQ-------RPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDR 780
            ASA++  D  G+ L+ R YR D+     ++F     + E       P +  NG+ Y+FIQHN++Y++A  +  + NAA+I  FLH++ +V   Y + +EEES+RDNFV++YELLDE+MD+G PQ TE K+L ++I   ++++  +        RPP+A+TN+VSWR EGI +KKNE FLD+VES+N+L+   GQ++RS+++G +K+ + LSGMP+ KLG+ND+
Sbjct:    2 ASAVYFCDHNGKPLLSRRYRDDIPLSAIDKFPILLSDLEEQSNLIPPCLNHNGLEYLFIQHNDLYVVAIVTSLSANAAAIFTFLHKLVEVLSDYLKTVEEESIRDNFVIIYELLDEVMDYGIPQITETKMLKQYITQKSFKLVKSAKKKRNATRPPVALTNSVSWRPEGITHKKNEAFLDIVESINMLMTQKGQVLRSEIIGDVKVNSKLSGMPDLKLGINDK 224          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M_DICDI (AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.906e-50
Identity = 100/236 (42.37%), Postives = 155/236 (65.68%), Query Frame = 1
Query:  139 SALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI--------KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRSTKGKS 822
            SALFL++ KG VLI R YR D+S   A  F  + I   G  ++++PV      ++M+I+  N+Y++  SRQN NA  +   LH++ D+FK YF+ L+E+S+R+NFV+VYELLDEI+DFG+PQ     +L  +I          D  + +   +  +  T    WR+  I+YK+NE+++DVVESVN+L+++ G I+R+DV G + M+ +LSGMPECK G+ND+V+++ + +ST G S
Sbjct:    3 SALFLMNGKGEVLISRIYRDDISRGVANAFRLEVI---GSQETRSPVKLIGSTSFMYIKVGNIYIVGVSRQNVNACMVFEVLHQLVDIFKSYFDNLDEDSIRNNFVLVYELLDEILDFGYPQNCSTDVLKLYITQGQGKLKSLDKLKQDKISKITIQATGTTPWRTPDIKYKRNELYIDVVESVNLLMSAEGNILRADVSGQVMMKCFLSGMPECKFGMNDKVIMDRE-KSTNGGS 234          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_CHICK (AP-2 complex subunit mu-1 OS=Gallus gallus GN=AP2M1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.365e-47
Identity = 91/225 (40.44%), Postives = 145/225 (64.44%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVTQRPPMA---VTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     + +  +        VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 227          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_XENTR (AP-2 complex subunit mu-1 OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_XENLA (AP-2 complex subunit mu-1 OS=Xenopus laevis GN=ap2m1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMTAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_RAT (AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_PONAB (AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 92/227 (40.53%), Postives = 147/227 (64.76%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI+R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN +AA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLIYRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVDAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_MOUSE (AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_MACFA (AP-2 complex subunit mu-1 OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP2M1_HUMAN (AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 93/227 (40.97%), Postives = 146/227 (64.32%), Query Frame = 1
Query:  145 LFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFI-----KTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRVLLEAQGRST 810
            LF+ + KG VLI R YR D+     + F    I      Q ++PV      ++  ++ +N++L A ++QN NAA +  FL+++ DV   YF ++ EE++++NFV++YELLDEI+DFG+PQ +E   L  FI     K+     E   +    VT  + WR EGI+Y++NE+FLDV+ESVN+L++  GQ++ + V G + M++YLSGMPECK G+ND++++E QG+ T
Sbjct:    5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHAR--QQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGT 229          
The following BLAST results are available for this feature:
BLAST of CX672059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
AP1M1_YEAST2.037e-5243.95AP-1 complex subunit mu-1-I OS=Saccharomyces cerev... [more]
AP2M_DICDI1.906e-5042.37AP-2 complex subunit mu OS=Dictyostelium discoideu... [more]
AP2M1_CHICK3.365e-4740.44AP-2 complex subunit mu-1 OS=Gallus gallus GN=AP2M... [more]
AP2M1_XENTR5.740e-4740.97AP-2 complex subunit mu-1 OS=Xenopus tropicalis GN... [more]
AP2M1_XENLA5.740e-4740.97AP-2 complex subunit mu-1 OS=Xenopus laevis GN=ap2... [more]
AP2M1_RAT5.740e-4740.97AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap... [more]
AP2M1_PONAB5.740e-4740.53AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 P... [more]
AP2M1_MOUSE5.740e-4740.97AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 P... [more]
AP2M1_MACFA5.740e-4740.97AP-2 complex subunit mu-1 OS=Macaca fascicularis G... [more]
AP2M1_HUMAN5.740e-4740.97AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14F11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F11-K22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672059 ID=CX672059; Name=CX672059; organism=Citrus sinensis; type=EST; length=831bp
AAGAATTTGCAGTAGAAAAGTTTTGTTCATTCAATTTGTCATTTGTGAGA
TTCATACCTGCACTGCCGCAGCTCGGATCTGGTGCTGGTGTTATACGCCG
GTGAGGTGAGGCTCTTTCATCAGATGGCTGGCGCCGCCTCGGCGCTCTTC
CTTCTTGACATCAAAGGACGTGTCTTGATTTGGCGTGATTATCGCGGCGA
TGTCTCCGCTATTCAAGCTGAACGCTTCTTCACCAAGTTCATCGAGAAAG
AGGGGGATCCGCAATCGCAAAATCCTGTGGTATTCGACAATGGTGTGACC
TACATGTTTATACAACACAACAATGTTTACCTGATGGCTGCTTCGAGGCA
GAACTGCAATGCTGCCAGTATTTTGTTATTTTTGCATCGCGTAGCTGATG
TGTTTAAACATTACTTTGAAGAGTTAGAAGAGGAATCTTTGCGAGATAAT
TTTGTGGTTGTGTATGAGTTGCTTGATGAGATAATGGACTTCGGTTTCCC
TCAATTCACTGAGGCAAAGATTCTTAGCGAGTTTATTAAGACTGATGCTT
ATAGGATGGAAGTTACACAGCGTCCTCCCATGGCTGTGACGAATGCAGTA
TCTTGGCGCAGTGAAGGGATACGGTACAAGAAAAACGAAGTTTTTCTGGA
TGTGGTCGAAAGTGTCAATATACTGGTCAACAGCAATGGGCAGATAGTCC
GTTCAGATGTTGTTGGGGCATTAAAAATGAGAACGTATTTGAGTGGTATG
CCTGAGTGTAAGCTTGGCCTAAATGATAGAGTACTACTGGAGGCACAGGG
TCGATCCACTAAAGGGAAAAGCATTGATCTG
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