CX672059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_PONAB (AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27 Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DVVE ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_MOUSE (AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27 Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DVVE ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27 Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DVVE ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_BOVIN (AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.868e-27 Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAY----------RMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DVVE ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSGVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_CHICK (AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.125e-26 Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DV+E ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAIDVENVPPVISTPLHYLISIYRDKIFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSETAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVIEEIDAIIDKSGSTVFAEIQGVIDSCIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_RAT (AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.507e-26 Identity = 69/226 (30.53%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + EK D ++ V+ + I + ++ ++ + ++ FLHRVAD F+ YF E E +++DN V+VYELL+E++D GFP TE+ IL E IK V P + + WR G++Y NE + DVVE ++ +++ +G V +++ G + LSGMP+ L +N R+L Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPTVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_MOUSE (AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.772e-25 Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + E+ + ++ PV+ + + + ++ +A + ++ FLHRV D F+ YF E ++DN VVVYE+L+E++D GFP TE+ IL E IK T V + P + V WR G++Y NE + DVVE ++ +++ +G V +++ G + L+GMP+ L +N R+L Sbjct: 4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.621e-25 Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + E+ + ++ PV+ + + + ++ +A + ++ FLHRV D F+ YF E ++DN VVVYE+L+E++D GFP TE+ IL E IK T V + P + V WR G++Y NE + DVVE ++ +++ +G V +++ G + L+GMP+ L +N R+L Sbjct: 4 SLFLINSAGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_HUMAN (AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.729e-25 Identity = 65/226 (28.76%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G + + + ++ VS + FF + E+ + ++ PV+ + + + ++ +A + ++ FLHRV D F+ YF E ++DN VVVYE+L+E++D GFP TE+ IL E IK T V + P + V WR G++Y NE + DV+E ++ +++ +G + +++ G + L+GMP+ L +N R+L Sbjct: 4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP1M_DISOM (AP-1 complex subunit mu OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24 Identity = 68/226 (30.09%), Postives = 113/226 (50.00%), Query Frame = 1 Query: 142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786 +LFL++ G V + + +R VS + K G P++ PV+ + + + +A + ++ FLHRVA+ + YF E E S++DN V+VYELL+E++D GFP TE+ IL E IK V + P + + WR G++Y NE + DV E ++ +++ +G V +++ G + L+GMP+ L LN R+L Sbjct: 4 SLFLMNGGGAVFLEKHWRSVVSRSVCAYLLEAQL-KAGQPENVAPVLATPHHYLVSTHRHGISFVAVIQAEVPPLFVIEFLHRVAETLQDYFGECSEASIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDQLPTGQLSNIPWRRVGVKYTNNEAYFDVTEEIDAIIDKSGSTVFAEIQGVIDACIKLTGMPDLTLSFLNPRLL 228 The following BLAST results are available for this feature:
BLAST of CX672059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672059 ID=CX672059; Name=CX672059; organism=Citrus sinensis; type=EST; length=831bpback to top |