CX672059

Overview
NameCX672059
Unique NameCX672059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_PONAB (AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27
Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++  PV+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK       V              P    + + WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_MOUSE (AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27
Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++  PV+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK       V              P    + + WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.962e-27
Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++  PV+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK       V              P    + + WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_BOVIN (AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.868e-27
Identity = 70/226 (30.97%), Postives = 119/226 (52.65%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAY----------RMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++  PV+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK                 V    P    + + WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSGVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_CHICK (AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.125e-26
Identity = 69/226 (30.53%), Postives = 119/226 (52.65%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++  PV+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK       V              P    + + WR  G++Y  NE + DV+E ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAIDVENVPPVISTPLHYLISIYRDKIFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSETAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVIEEIDAIIDKSGSTVFAEIQGVIDSCIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M1_RAT (AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.507e-26
Identity = 69/226 (30.53%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  EK  D ++   V+       + I  + ++ ++  +       ++ FLHRVAD F+ YF E  E +++DN V+VYELL+E++D GFP  TE+ IL E IK       V              P    + + WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     LSGMP+  L  +N R+L
Sbjct:    4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPTVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_MOUSE (AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.772e-25
Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  E+  + ++  PV+       + +  + ++ +A  +       ++ FLHRV D F+ YF    E  ++DN VVVYE+L+E++D GFP  TE+ IL E IK          T      V  + P    + V WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     L+GMP+  L  +N R+L
Sbjct:    4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.621e-25
Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  E+  + ++  PV+       + +  + ++ +A  +       ++ FLHRV D F+ YF    E  ++DN VVVYE+L+E++D GFP  TE+ IL E IK          T      V  + P    + V WR  G++Y  NE + DVVE ++ +++ +G  V +++ G +     L+GMP+  L  +N R+L
Sbjct:    4 SLFLINSAGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP3M2_HUMAN (AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.729e-25
Identity = 65/226 (28.76%), Postives = 118/226 (52.21%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIK----------TDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G + + + ++  VS    + FF +  E+  + ++  PV+       + +  + ++ +A  +       ++ FLHRV D F+ YF    E  ++DN VVVYE+L+E++D GFP  TE+ IL E IK          T      V  + P    + V WR  G++Y  NE + DV+E ++ +++ +G  + +++ G +     L+GMP+  L  +N R+L
Sbjct:    4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLL 228          
BLAST of CX672059 vs. ExPASy Swiss-Prot
Match: AP1M_DISOM (AP-1 complex subunit mu OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.228e-24
Identity = 68/226 (30.09%), Postives = 113/226 (50.00%), Query Frame = 1
Query:  142 ALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVT----------QRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLG-LNDRVL 786
            +LFL++  G V + + +R  VS           + K G P++  PV+       +    + +  +A  +       ++ FLHRVA+  + YF E  E S++DN V+VYELL+E++D GFP  TE+ IL E IK       V            + P    + + WR  G++Y  NE + DV E ++ +++ +G  V +++ G +     L+GMP+  L  LN R+L
Sbjct:    4 SLFLMNGGGAVFLEKHWRSVVSRSVCAYLLEAQL-KAGQPENVAPVLATPHHYLVSTHRHGISFVAVIQAEVPPLFVIEFLHRVAETLQDYFGECSEASIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDQLPTGQLSNIPWRRVGVKYTNNEAYFDVTEEIDAIIDKSGSTVFAEIQGVIDACIKLTGMPDLTLSFLNPRLL 228          
The following BLAST results are available for this feature:
BLAST of CX672059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
AP3M1_PONAB2.962e-2730.97AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1... [more]
AP3M1_MOUSE2.962e-2730.97AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1... [more]
AP3M1_HUMAN2.962e-2730.97AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1... [more]
AP3M1_BOVIN3.868e-2730.97AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 P... [more]
AP3M1_CHICK1.125e-2630.53AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M... [more]
AP3M1_RAT2.507e-2630.53AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=... [more]
AP3M2_MOUSE2.772e-2529.65AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2... [more]
AP3M2_RAT3.621e-2529.65AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=... [more]
AP3M2_HUMAN4.729e-2528.76AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2... [more]
AP1M_DISOM5.228e-2430.09AP-1 complex subunit mu OS=Discopyge ommata PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14F11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F11-K22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672059 ID=CX672059; Name=CX672059; organism=Citrus sinensis; type=EST; length=831bp
AAGAATTTGCAGTAGAAAAGTTTTGTTCATTCAATTTGTCATTTGTGAGA
TTCATACCTGCACTGCCGCAGCTCGGATCTGGTGCTGGTGTTATACGCCG
GTGAGGTGAGGCTCTTTCATCAGATGGCTGGCGCCGCCTCGGCGCTCTTC
CTTCTTGACATCAAAGGACGTGTCTTGATTTGGCGTGATTATCGCGGCGA
TGTCTCCGCTATTCAAGCTGAACGCTTCTTCACCAAGTTCATCGAGAAAG
AGGGGGATCCGCAATCGCAAAATCCTGTGGTATTCGACAATGGTGTGACC
TACATGTTTATACAACACAACAATGTTTACCTGATGGCTGCTTCGAGGCA
GAACTGCAATGCTGCCAGTATTTTGTTATTTTTGCATCGCGTAGCTGATG
TGTTTAAACATTACTTTGAAGAGTTAGAAGAGGAATCTTTGCGAGATAAT
TTTGTGGTTGTGTATGAGTTGCTTGATGAGATAATGGACTTCGGTTTCCC
TCAATTCACTGAGGCAAAGATTCTTAGCGAGTTTATTAAGACTGATGCTT
ATAGGATGGAAGTTACACAGCGTCCTCCCATGGCTGTGACGAATGCAGTA
TCTTGGCGCAGTGAAGGGATACGGTACAAGAAAAACGAAGTTTTTCTGGA
TGTGGTCGAAAGTGTCAATATACTGGTCAACAGCAATGGGCAGATAGTCC
GTTCAGATGTTGTTGGGGCATTAAAAATGAGAACGTATTTGAGTGGTATG
CCTGAGTGTAAGCTTGGCCTAAATGATAGAGTACTACTGGAGGCACAGGG
TCGATCCACTAAAGGGAAAAGCATTGATCTG
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